RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MRPL58Q14197 206 aaKnown RBP18.32■□□□□ 0.52
SCAF11-206ENST00000474828 DUSP6Q16828 381 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 C1orf220Q5T0J3 134 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 ADGRD2Q7Z7M1 963 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 LRRC52Q8N7C0 313 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 MLKLQ8NB16 471 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 CACTINQ8WUQ7 758 aaKnown RBP18.32■□□□□ 0.52
SCAF11-206ENST00000474828 PIK3R5Q8WYR1 880 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 FAM212AQ96EL1 285 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 CGRRF1Q99675 332 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 DUSP9Q99956 384 aaKnown RBP18.32■□□□□ 0.52
SCAF11-206ENST00000474828 SIX4Q9UIU6 781 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 ITGA11Q9UKX5 1188 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 PCDHGC5Q9Y5F6 944 aa18.32■□□□□ 0.52
SCAF11-206ENST00000474828 PPEF2O14830 753 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 IKBKBO14920 756 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 TBC1D4O60343 1298 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 PAPLNO95428 1278 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 CXCL14O95715 111 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 PSMC2P35998 433 aaKnown RBP18.31■□□□□ 0.52
SCAF11-206ENST00000474828 GLUD2P49448 558 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 AP3M2P53677 418 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
SCAF11-206ENST00000474828 BMS1Q14692 1282 aaKnown RBP18.31■□□□□ 0.52
SCAF11-206ENST00000474828 DUOXA2Q1HG44 320 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 RTP2Q5QGT7 225 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 TMEM130Q8N3G9 435 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 EFHBQ8N7U6 833 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 RDH13Q8NBN7 331 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 OR5B17Q8NGF7 314 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 LNX1Q8TBB1 728 aaPredicted RBP18.31■□□□□ 0.52
SCAF11-206ENST00000474828 ZNF516Q92618 1163 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 PPP2R3CQ969Q6 453 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 MED15Q96RN5 788 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 TTPALQ9BTX7 342 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 ENTPD7Q9NQZ7 604 aa18.31■□□□□ 0.52
SCAF11-206ENST00000474828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCAF11-206ENST00000474828 MRPL17Q9NRX2 175 aaKnown RBP18.31■□□□□ 0.52
SCAF11-206ENST00000474828 BIN1O00499 593 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 SPTLC1O15269 473 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 ADAM15Q13444 863 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 CT47A1Q5JQC4 288 aaPredicted RBP18.3■□□□□ 0.52
SCAF11-206ENST00000474828 FAM171A1Q5VUB5 890 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 ISM2Q6H9L7 571 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 PDXDC1Q6P996 788 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 C15orf39Q6ZRI6 1047 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 INTS8Q75QN2 995 aaKnown RBP18.3■□□□□ 0.52
SCAF11-206ENST00000474828 LIMS2Q7Z4I7 341 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 PABPC5Q96DU9 382 aaKnown RBP18.3■□□□□ 0.52
SCAF11-206ENST00000474828 FRMD4BQ9Y2L6 1034 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 BACE2Q9Y5Z0 518 aa18.3■□□□□ 0.52
SCAF11-206ENST00000474828 LRRIQ3A6PVS8 624 aaPredicted RBP18.29■□□□□ 0.52
SCAF11-206ENST00000474828 CETN3O15182 167 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 SLC16A3O15427 465 aaKnown RBP18.29■□□□□ 0.52
SCAF11-206ENST00000474828 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
SCAF11-206ENST00000474828 CYP11A1P05108 521 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 URODP06132 367 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 CNPP09543 421 aaKnown RBP18.29■□□□□ 0.52
SCAF11-206ENST00000474828 LTBRP36941 435 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 PNPLA4P41247 253 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 BRCC3P46736 316 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 TFAMQ00059 246 aaKnown RBP18.29■□□□□ 0.52
SCAF11-206ENST00000474828 CREMQ03060 361 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 PLPP4Q5VZY2 271 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 TRAPPC11Q7Z392 1133 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 MICAL1Q8TDZ2 1067 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 HASPINQ8TF76 798 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 SLC22A17Q8WUG5 538 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 CEP63Q96MT8 703 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 KLHL5Q96PQ7 755 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 TSG101Q99816 390 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 MTMR12Q9C0I1 747 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 TLE6Q9H808 572 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 GDAP2Q9NXN4 497 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 PCDHB8Q9UN66 801 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 UNC80Q8N2C7 3258 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 VWA8A3KMH1 1905 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 MYO7AQ13402 2215 aa18.29■□□□□ 0.52
SCAF11-206ENST00000474828 BICDL2A1A5D9 508 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 TRIM49BA6NDI0 452 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
SCAF11-206ENST00000474828 OAZ2O95190 189 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 C4BPAP04003 597 aaKnown RBP18.28■□□□□ 0.52
SCAF11-206ENST00000474828 TYMPP19971 482 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 MARSP56192 900 aaKnown RBP18.28■□□□□ 0.52
SCAF11-206ENST00000474828 NLRP12P59046 1061 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 PAK1Q13153 545 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 SCARA3Q6AZY7 606 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 FILIP1Q7Z7B0 1213 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 FAM186BQ8IYM0 893 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 VN1R2Q8NFZ6 395 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 NELFBQ8WX92 580 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 CCDC127Q96BQ5 260 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 ANKRD36BP1Q96IX9 119 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 FNBP1Q96RU3 617 aa18.28■□□□□ 0.52
SCAF11-206ENST00000474828 POP1Q99575 1024 aaKnown RBP18.28■□□□□ 0.52
SCAF11-206ENST00000474828 VRTNQ9H8Y1 702 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms