RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 XXYLT1Q8NBI6 393 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 C3orf58Q8NDZ4 430 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 NELFBQ8WX92 580 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 RABGGTAQ92696 567 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 P2RX5Q93086 422 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 CCDC47Q96A33 483 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 DHTKD1Q96HY7 919 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 CCDC94Q9BW85 323 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 NSUN3Q9H649 340 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 RPF1Q9H9Y2 349 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 PLEKHA5Q9HAU0 1116 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 GOLGA2P5Q9HBQ8 144 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 PDE11AQ9HCR9 933 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 UBN1Q9NPG3 1134 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 MARCH5Q9NX47 278 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 CGNQ9P2M7 1197 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 TUBGCP4Q9UGJ1 667 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 CTNND2Q9UQB3 1225 aa7.59□□□□□ -1.19
LIMD1-204ENST00000474665 FASNP49327 2511 aaKnown RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 EP300Q09472 2414 aaPredicted RBP7.59□□□□□ -1.19
LIMD1-204ENST00000474665 NT5C1B-RDH14C9J2C7 533 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 C5orf67F2Z3F1 127 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 PPEF2O14830 753 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 KIAA0391O15091 583 aaKnown RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 LINC01565O15544 149 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 ZIC2O95409 532 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 NR2F2P24468 414 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 DNAJB1P25685 340 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 GTF2F1P35269 517 aaKnown RBP eCLIP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 BCAR1P56945 870 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 DLG4P78352 724 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 CLDN10P78369 228 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 POU5F1Q01860 360 aaKnown RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 CYP24A1Q07973 514 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 GRIK3Q13003 919 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 ADAM9Q13443 819 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 TUSC3Q13454 348 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 GPM6BQ13491 265 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 MYBPC2Q14324 1141 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 CBX2Q14781 532 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 CTC1Q2NKJ3 1217 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 EPC2Q52LR7 807 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 LMBRD2Q68DH5 695 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 JADE1Q6IE81 842 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 FOXR2Q6PJQ5 311 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 KCNT2Q6UVM3 1135 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 APBB1IPQ7Z5R6 666 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 ABI1Q8IZP0 508 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 FIBCD1Q8N539 461 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 MLKLQ8NB16 471 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 COLGALT1Q8NBJ5 622 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 RDH13Q8NBN7 331 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 OR5B17Q8NGF7 314 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 GOLGA5Q8TBA6 731 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 PARD3BQ8TEW8 1205 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 GTPBP4Q9BZE4 634 aaKnown RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 IGFLR1Q9H665 355 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 TOPORSQ9NS56 1045 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
LIMD1-204ENST00000474665 KANSL3Q9P2N6 904 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 SIX4Q9UIU6 781 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 CD207Q9UJ71 328 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 PCDHGC5Q9Y5F6 944 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 ZNF292O60281 2723 aa7.58□□□□□ -1.2
LIMD1-204ENST00000474665 SETXQ7Z333 2677 aaKnown RBP7.57□□□□□ -1.2
LIMD1-204ENST00000474665 VPS13AQ96RL7 3174 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 ANO9A1A5B4 782 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 CASTOR2A6NHX0 329 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 ZNF233A6NK53 670 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 NRP1O14786 923 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 PSMA7O14818 248 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 GRM6O15303 877 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 CALUO43852 315 aaPredicted RBP7.57□□□□□ -1.2
LIMD1-204ENST00000474665 EXOC3O60645 756 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 ZC3H11AO75152 810 aaKnown RBP eCLIP7.57□□□□□ -1.2
LIMD1-204ENST00000474665 TBX10O75333 385 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 LDHAP00338 332 aaKnown RBP7.57□□□□□ -1.2
LIMD1-204ENST00000474665 THP07101 528 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 CLCNKBP51801 687 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 YARSP54577 528 aaKnown RBP7.57□□□□□ -1.2
LIMD1-204ENST00000474665 LRRC63Q05C16 580 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 TYRO3Q06418 890 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 HYAL1Q12794 435 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 PAK1Q13153 545 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 PSMD6Q15008 389 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 KYAT1Q16773 422 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 UPP1Q16831 310 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 ZSCAN23Q3MJ62 389 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 SPATA1Q5VX52 437 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 TAS1R1Q7RTX1 841 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 HACE1Q8IYU2 909 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 RNF168Q8IYW5 571 aaPredicted RBP7.57□□□□□ -1.2
LIMD1-204ENST00000474665 SLC39A11Q8N1S5 342 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 DCLK2Q8N568 766 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 C1orf127Q8N9H9 656 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 KLHL23Q8NBE8 558 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 SPPL3Q8TCT6 385 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 URGCPQ8TCY9 931 aa7.57□□□□□ -1.2
LIMD1-204ENST00000474665 NOC3LQ8WTT2 800 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms