RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ACAP3Q96P50 834 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 TARS2Q9BW92 718 aaKnown RBP15.32■□□□□ 0.04
CCDC78-209ENST00000474647 KMT5AQ9NQR1 393 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 ANKFY1Q9P2R3 1169 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 FBXL5Q9UKA1 691 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 GMEB2Q9UKD1 530 aa15.32■□□□□ 0.04
CCDC78-209ENST00000474647 SCN1AP35498 2009 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 E9PMD0 336 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 MAN2B1O00754 1011 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 NRG2O14511 850 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-209ENST00000474647 HIP1RO75146 1068 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 GJA1P17302 382 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC78-209ENST00000474647 LMNB2Q03252 620 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 TWF1Q12792 350 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 PPP2R5DQ14738 602 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 VITQ6UXI7 678 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 ALKAL1Q6UXT8 129 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 CCDC83Q8IWF9 413 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 FAM3CQ92520 227 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 IRF7Q92985 503 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 ZNF512Q96ME7 567 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-209ENST00000474647 ASB16Q96NS5 453 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 FOXP1Q9H334 677 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-209ENST00000474647 SLITRK6Q9H5Y7 841 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 DAXXQ9UER7 740 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-209ENST00000474647 RAB23Q9ULC3 237 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 NOL7Q9UMY1 257 aaKnown RBP15.31■□□□□ 0.04
CCDC78-209ENST00000474647 PIAS3Q9Y6X2 628 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 MYO16Q9Y6X6 1858 aa15.31■□□□□ 0.04
CCDC78-209ENST00000474647 SHISA7A6NL88 538 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 SLC16A4O15374 487 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 MCF2P10911 925 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 PSMC3P17980 439 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 SDHBP21912 280 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 VIPR2P41587 438 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 FZD5Q13467 585 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 SEZ6Q53EL9 994 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 XKR4Q5GH76 650 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 TPGS2Q68CL5 300 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 MPZL3Q6UWV2 235 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 PRR23BQ6ZRT6 265 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 TAS1R3Q7RTX0 852 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 NELL1Q92832 810 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 SMARCD2Q92925 531 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 DRC1Q96MC2 740 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 ZSWIM3Q96MP5 696 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 TBC1D32Q96NH3 1257 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 FAM126AQ9BYI3 521 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-209ENST00000474647 CHRDQ9H2X0 955 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 TMEM134Q9H6X4 195 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 ZNF334Q9HCZ1 680 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-209ENST00000474647 PTPRHQ9HD43 1115 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 ASAH2Q9NR71 780 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 CNTN3Q9P232 1028 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 TUBGCP4Q9UGJ1 667 aa15.3■□□□□ 0.04
CCDC78-209ENST00000474647 KMT2BQ9UMN6 2715 aaPredicted RBP15.3■□□□□ 0.04
CCDC78-209ENST00000474647 PP2D1A8MPX8 630 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 TBC1D4O60343 1298 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 KCNE1P15382 129 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 RPL9P32969 192 aaKnown RBP15.29■□□□□ 0.04
CCDC78-209ENST00000474647 MATR3P43243 847 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC78-209ENST00000474647 ATXN1P54253 815 aaKnown RBP15.29■□□□□ 0.04
CCDC78-209ENST00000474647 STRN3Q13033 797 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 DAW1Q8N136 415 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 APPL2Q8NEU8 664 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 ZSCAN18Q8TBC5 510 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-209ENST00000474647 DDX12PQ92771 950 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 ZBTB45Q96K62 511 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-209ENST00000474647 SUSD3Q96L08 255 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 CNTNAP3BQ96NU0 1288 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 RUSC1Q9BVN2 902 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 CNTNAP3Q9BZ76 1288 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 LMAN1LQ9HAT1 526 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 CEP72Q9P209 647 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 ARHGAP28Q9P2N2 729 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 DNM3Q9UQ16 869 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 KIAA1549LQ6ZVL6 1849 aa15.29■□□□□ 0.04
CCDC78-209ENST00000474647 NCANO14594 1321 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 PRR5-ARHGAP8B1AHC4 643 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 ZNF263O14978 683 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 MICAL2O94851 1124 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 MARCKSP29966 332 aaPredicted RBP15.28■□□□□ 0.04
CCDC78-209ENST00000474647 CCR3P51677 355 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 NRLP54845 237 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 ARHGAP8P85298 464 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 RAD51AP2Q09MP3 1159 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 SPEM2Q0P670 501 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 MRPL58Q14197 206 aaKnown RBP15.28■□□□□ 0.04
CCDC78-209ENST00000474647 NOLC1Q14978 699 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC78-209ENST00000474647 TEAD2Q15562 447 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 ZRSR1Q15695 479 aaKnown RBP15.28■□□□□ 0.04
CCDC78-209ENST00000474647 KRT79Q5XKE5 535 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 RNF19BQ6ZMZ0 732 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 MAP4K3Q8IVH8 894 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 TMEM130Q8N3G9 435 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 FAM184AQ8NB25 1140 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 CSGALNACT1Q8TDX6 532 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 DEPDC1BQ8WUY9 529 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms