RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 POLR2BP30876 1174 aaKnown RBP19.58■□□□□ 0.72
SNRPB-203ENST00000474384 IRS1P35568 1242 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 BRCC3P46736 316 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 CLDN10P78369 228 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 BFSP1Q12934 665 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 PTPROQ16827 1216 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 CT47A1Q5JQC4 288 aaPredicted RBP19.58■□□□□ 0.72
SNRPB-203ENST00000474384 C1orf220Q5T0J3 134 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 C11orf57Q6ZUT1 292 aaPredicted RBP19.58■□□□□ 0.72
SNRPB-203ENST00000474384 TRAPPC11Q7Z392 1133 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 TMC7Q7Z402 723 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 MICAL1Q8TDZ2 1067 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 MRPL38Q96DV4 380 aaKnown RBP19.58■□□□□ 0.72
SNRPB-203ENST00000474384 B3GALT6Q96L58 329 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 AGAP1Q9UPQ3 857 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 PCDHGC5Q9Y5F6 944 aa19.58■□□□□ 0.72
SNRPB-203ENST00000474384 SF3B1O75533 1304 aaKnown RBP eCLIP19.57■□□□□ 0.723e-6■■■■■ 137.9
SNRPB-203ENST00000474384 SOD2P04179 222 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 KRT19P08727 400 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 TRIM49P0CI25 452 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 TRIM49CP0CI26 452 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 CCDC40Q4G0X9 1142 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 FAM171A1Q5VUB5 890 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 USP37Q86T82 979 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 RNF168Q8IYW5 571 aaPredicted RBP19.57■□□□□ 0.72
SNRPB-203ENST00000474384 CXorf38Q8TB03 319 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 AUTS2Q8WXX7 1259 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 TCF25Q9BQ70 676 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 ZBP1Q9H171 429 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 DNAJC25Q9H1X3 360 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 ENTPD7Q9NQZ7 604 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 LMCD1Q9NZU5 365 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 ARMCX3Q9UH62 379 aaPredicted RBP19.57■□□□□ 0.72
SNRPB-203ENST00000474384 SIX4Q9UIU6 781 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 ITGA11Q9UKX5 1188 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 MTCH2Q9Y6C9 303 aa19.57■□□□□ 0.72
SNRPB-203ENST00000474384 IKBKBO14920 756 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 FSCN2O14926 492 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 TRAPPC3O43617 180 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 FGFR1OPO95684 399 aaKnown RBP19.56■□□□□ 0.72
SNRPB-203ENST00000474384 CXCL14O95715 111 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 POU3F3P20264 500 aaPredicted RBP19.56■□□□□ 0.72
SNRPB-203ENST00000474384 AP3M2P53677 418 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 LILRA4P59901 499 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 MCCD1P59942 119 aaPredicted RBP19.56■□□□□ 0.72
SNRPB-203ENST00000474384 RBP5P82980 135 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 ELAVL2Q12926 359 aaKnown RBP19.56■□□□□ 0.72
SNRPB-203ENST00000474384 TPD52L1Q16890 204 aaPredicted RBP19.56■□□□□ 0.72
SNRPB-203ENST00000474384 USP41Q3LFD5 358 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 ZSCAN23Q3MJ62 389 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 TIGD5Q53EQ6 642 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 PLPP4Q5VZY2 271 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 FRMD5Q7Z6J6 570 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 HERC2P3Q9BVR0 1158 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 STK39Q9UEW8 545 aa19.56■□□□□ 0.72
SNRPB-203ENST00000474384 REV3LO60673 3130 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 SPTLC1O15269 473 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 PHACTR2O75167 634 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 CST3P01034 146 aaPredicted RBP19.55■□□□□ 0.72
SNRPB-203ENST00000474384 C4BPAP04003 597 aaKnown RBP19.55■□□□□ 0.72
SNRPB-203ENST00000474384 CTSAP10619 480 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 FOSL2P15408 326 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 CA8P35219 290 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 SCN1AP35498 2009 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 ENPEPQ07075 957 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 PPP3CAQ08209 521 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 BIRC3Q13489 604 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 TDRD10Q5VZ19 366 aaKnown RBP19.55■□□□□ 0.72
SNRPB-203ENST00000474384 CEP57Q86XR8 500 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 METTL14Q9HCE5 456 aaKnown RBP19.55■□□□□ 0.72
SNRPB-203ENST00000474384 NGRNQ9NPE2 291 aaKnown RBP19.55■□□□□ 0.72
SNRPB-203ENST00000474384 CHST7Q9NS84 486 aa19.55■□□□□ 0.72
SNRPB-203ENST00000474384 R3HCC1Q9Y3T6 440 aaKnown RBP19.55■□□□□ 0.72
SNRPB-203ENST00000474384 HIDE1A8MVS5 230 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 C2CD2LO14523 706 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 GNA14O95837 355 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 CCDC192P0DO97 292 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 GCLMP48507 274 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 GLUD2P49448 558 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 TAF6P49848 677 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 SMC1AQ14683 1233 aaKnown RBP19.54■□□□□ 0.72
SNRPB-203ENST00000474384 ANO6Q4KMQ2 910 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 DCAF17Q5H9S7 520 aaPredicted RBP19.54■□□□□ 0.72
SNRPB-203ENST00000474384 RTP2Q5QGT7 225 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 KIAA0319Q5VV43 1072 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 TCERG1LQ5VWI1 586 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 PDE12Q6L8Q7 609 aaKnown RBP19.54■□□□□ 0.72
SNRPB-203ENST00000474384 KIAA1841Q6NSI8 718 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 DSTYKQ6XUX3 929 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 SV2AQ7L0J3 742 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 IRF2BP1Q8IU81 584 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 CREBRFQ8IUR6 639 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 MICALL1Q8N3F8 863 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 MRPL43Q8N983 215 aaKnown RBP19.54■□□□□ 0.72
SNRPB-203ENST00000474384 SUSD3Q96L08 255 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 FUCA2Q9BTY2 467 aa19.54■□□□□ 0.72
SNRPB-203ENST00000474384 MYO7AQ13402 2215 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 ATG2AQ2TAZ0 1938 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 URODP06132 367 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms