RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MSL2Q9HCI7 577 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 AGO4Q9HCK5 861 aaKnown RBP5.1□□□□□ -1.59
BRCA1-212ENST00000473961 SACM1LQ9NTJ5 587 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 ING3Q9NXR8 418 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-212ENST00000473961 FNIP2Q9P278 1114 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 PCDHA6Q9UN73 950 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 MED16Q9Y2X0 877 aa5.1□□□□□ -1.59
BRCA1-212ENST00000473961 F2RL2O00254 374 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 SKAP2O75563 359 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 WDHD1O75717 1129 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 SNRPA1P09661 255 aaKnown RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 TSHRP16473 764 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 TNFRSF1AP19438 455 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 GZMKP49863 264 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 SOX8P57073 446 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 POU6F2P78424 691 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 APBA1Q02410 837 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 ARL13BQ3SXY8 428 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 ALFQ53S48 1182 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 FAM47AQ5JRC9 791 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 FAM26FQ5R3K3 315 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 PRAMEF14Q5SWL7 426 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 LMBRD2Q68DH5 695 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 CCDC70Q6NSX1 233 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 CNKSR3Q6P9H4 555 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 FAM124AQ86V42 546 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 FAM90A1Q86YD7 464 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 LIX1LQ8IVB5 337 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 CMTM4Q8IZR5 234 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 NKAPQ8N5F7 415 aaKnown RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 NUDT10Q8NFP7 164 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 FNIP1Q8TF40 1166 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 KIAA1191Q96A73 305 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 NUDT11Q96G61 164 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 YTHDC1Q96MU7 727 aaKnown RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 TEPSINQ96N21 525 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 ISCA1Q9BUE6 129 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 TRIM54Q9BYV2 358 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF518BQ9C0D4 1074 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 MYLK2Q9H1R3 596 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 BRD9Q9H8M2 597 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 LUZP4Q9P127 313 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 SRRDQ9UH36 339 aa5.09□□□□□ -1.59
BRCA1-212ENST00000473961 USP19O94966 1318 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 A0A087WV62 115 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 C2orf78A6NCI8 922 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 NT5C1B-RDH14C9J2C7 533 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 MYO1CO00159 1063 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 HNRNPDLO14979 420 aaKnown RBP5.08□□□□□ -1.6
BRCA1-212ENST00000473961 FFAR2O15552 330 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 PJA2O43164 708 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 PPFIA4O75335 1185 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ANXA1P04083 346 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 HSD3B1P14060 373 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 IDEP14735 1019 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ATP5JP18859 108 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 CHKAP35790 457 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 SLC13A2Q13183 592 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ELF2Q15723 593 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 CCDC38Q502W7 563 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 CCDC93Q567U6 631 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 OTUD7BQ6GQQ9 843 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 HIBCHQ6NVY1 386 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-212ENST00000473961 TLDC1Q6P9B6 456 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 RFX8Q6ZV50 586 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 SKAP1Q86WV1 359 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 PPP1R3BQ86XI6 285 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ZDHHC14Q8IZN3 488 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ZGPATQ8N5A5 531 aaKnown RBP5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ANKRD53Q8N9V6 530 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ATP11CQ8NB49 1132 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 IL17RDQ8NFM7 739 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 MDM1Q8TC05 714 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 EPC1Q9H2F5 836 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ADAM7Q9H2U9 754 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 SLAMF7Q9NQ25 335 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 NCDNQ9UBB6 729 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 CPNE7Q9UBL6 633 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 CDC23Q9UJX2 597 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ADAM29Q9UKF5 820 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 RUVBL1Q9Y265 456 aaKnown RBP5.08□□□□□ -1.6
BRCA1-212ENST00000473961 ACTL7AQ9Y615 435 aa5.08□□□□□ -1.6
BRCA1-212ENST00000473961 TTBK1Q5TCY1 1321 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-212ENST00000473961 A0A1W2PPC4 97 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 B5MCH6 92 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 GRM6O15303 877 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 ARHGAP6O43182 974 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 NCK2O43639 380 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 TLR5O60602 858 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 INMTO95050 263 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 PLA2G1BP04054 148 aaKnown RBP5.07□□□□□ -1.6
BRCA1-212ENST00000473961 ANXA2P07355 339 aaKnown RBP5.07□□□□□ -1.6
BRCA1-212ENST00000473961 ALOX15P16050 662 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-212ENST00000473961 PCSK1P29120 753 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 CSF2RBP32927 897 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 ALDH1A3P47895 512 aa5.07□□□□□ -1.6
BRCA1-212ENST00000473961 SARSP49591 514 aaKnown RBP5.07□□□□□ -1.6
BRCA1-212ENST00000473961 ADCY7P51828 1080 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms