RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PLAC9Q5JTB6 97 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 CEP85Q6P2H3 762 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 ZNF66Q6ZN08 573 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 Q6ZTC4 211 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 SEM1Q6ZVN7 128 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 USP43Q70EL4 1123 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 KRT78Q8N1N4 520 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 CASKIN2Q8WXE0 1202 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 TMEM125Q96AQ2 219 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 PBKQ96KB5 322 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 LYZL4Q96KX0 146 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 ALG8Q9BVK2 526 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 KLC4Q9NSK0 619 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 TXLNGQ9NUQ3 528 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 H2AFY2Q9P0M6 372 aaPredicted RBP2.98□□□□□ -1.93
CCDC39-203ENST00000473854 ST3GAL5Q9UNP4 418 aa2.98□□□□□ -1.93
CCDC39-203ENST00000473854 FAM83GA6ND36 823 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 UNCXA6NJT0 531 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 RAB11FIP3O75154 756 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 KCNA2P16389 499 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 DRD4P21917 467 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 SLC6A2P23975 617 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 PER3P56645 1201 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 FPGSQ05932 587 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 TRIM25Q14258 630 aaKnown RBP2.97□□□□□ -1.93
CCDC39-203ENST00000473854 RABEP1Q15276 862 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 PROSER3Q2NL68 480 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 SLC2A7Q6PXP3 512 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 LYSMD2Q8IV50 215 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 Q8NA96 180 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 B3GALNT2Q8NCR0 500 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 GPR156Q8NFN8 814 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 PRSS3P2Q8NHM4 247 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 SLC30A5Q8TAD4 765 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 MYCBPAPQ8TBZ2 947 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 LPIN2Q92539 896 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 PPP1R10Q96QC0 940 aaKnown RBP2.97□□□□□ -1.93
CCDC39-203ENST00000473854 QTRT1Q9BXR0 403 aaKnown RBP2.97□□□□□ -1.93
CCDC39-203ENST00000473854 SENP6Q9GZR1 1112 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-203ENST00000473854 SPRTNQ9H040 489 aaPredicted RBP2.97□□□□□ -1.93
CCDC39-203ENST00000473854 TMEM140Q9NV12 185 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 HSFX1Q9UBD0 423 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 PTCH2Q9Y6C5 1203 aa2.97□□□□□ -1.93
CCDC39-203ENST00000473854 CYP2D7A0A087X1C5 515 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 FAM90A8PA6NJQ4 464 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 KCNU1A8MYU2 1149 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 PRSS44E7EML9 344 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 MYO1FO00160 1098 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 TMEM191BP0C7N4 346 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 FAM90A13PP0C7W8 464 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 FAM90A24PP0C7X0 464 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 DSG1Q02413 1049 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 SEMA3AQ14563 771 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 ATP2B3Q16720 1220 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 PREPLQ4J6C6 727 aaPredicted RBP2.96□□□□□ -1.94
CCDC39-203ENST00000473854 CEP78Q5JTW2 689 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.96□□□□□ -1.94
CCDC39-203ENST00000473854 ZNF804AQ7Z570 1209 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 ACRBPQ8NEB7 543 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 CHTF18Q8WVB6 975 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 TBC1D5Q92609 795 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 DNAJC7Q99615 494 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 KCTD10Q9H3F6 313 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 FBXO34Q9NWN3 711 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 SNTG2Q9NY99 539 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 SERGEFQ9UGK8 458 aa2.96□□□□□ -1.94
CCDC39-203ENST00000473854 WDR27A2RRH5 827 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 TGM5O43548 720 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 KDM1AO60341 852 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 PRSS23O95084 383 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 ADSLP30566 484 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-203ENST00000473854 GUCY1A2P33402 732 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 ALDH1A3P47895 512 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 THBS3P49746 956 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 LGALS4P56470 323 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 LINC00205P59089 165 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 NOMO3P69849 1222 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 ZNF844Q08AG5 666 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 SART3Q15020 963 aaKnown RBP2.95□□□□□ -1.94
CCDC39-203ENST00000473854 NOMO1Q15155 1222 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 NOMO2Q5JPE7 1267 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 PRAMEF17Q5VTA0 474 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 ATG9BQ674R7 924 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 C11orf74Q86VG3 221 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 PQLC1Q8N2U9 271 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 SYNPOQ8N3V7 929 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 GALNT16Q8N428 558 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 CAMKK1Q8N5S9 505 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 NLGN4YQ8NFZ3 816 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-203ENST00000473854 RIN2Q8WYP3 895 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-203ENST00000473854 WBP1Q96G27 269 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 CLUHP3Q96NS8 147 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 ORAI2Q96SN7 254 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 THG1LQ9NWX6 298 aaKnown RBP2.95□□□□□ -1.94
CCDC39-203ENST00000473854 MAGEC2Q9UBF1 373 aaPredicted RBP2.95□□□□□ -1.94
CCDC39-203ENST00000473854 AFG3L2Q9Y4W6 797 aa2.95□□□□□ -1.94
CCDC39-203ENST00000473854 NISCHQ9Y2I1 1504 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 ENDOD1O94919 500 aa2.94□□□□□ -1.94
CCDC39-203ENST00000473854 FGBP02675 491 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms