RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SLC39A4Q6P5W5 647 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 PDXDC1Q6P996 788 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.66■□□□□ 0.74
SNX4-204ENST00000473417 CEP57Q86XR8 500 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 GLIS3Q8NEA6 775 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 SMG7Q92540 1137 aaKnown RBP19.66■□□□□ 0.74
SNX4-204ENST00000473417 HVCN1Q96D96 273 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 SNX27Q96L92 541 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 ACCSQ96QU6 501 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 CLSTN3Q9BQT9 956 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 HAPLN2Q9GZV7 340 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 GOLGA2P5Q9HBQ8 144 aa19.66■□□□□ 0.74
SNX4-204ENST00000473417 PVALEFA0A1B0GWK0 134 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 TISP43B9A030 160 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 GADD45BO75293 160 aaPredicted RBP19.65■□□□□ 0.74
SNX4-204ENST00000473417 PDGFBP01127 241 aaPredicted RBP19.65■□□□□ 0.74
SNX4-204ENST00000473417 PRR29P0C7W0 189 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 FGFR3P22607 806 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 IGFBP6P24592 240 aaPredicted RBP19.65■□□□□ 0.74
SNX4-204ENST00000473417 VCPP55072 806 aaKnown RBP19.65■□□□□ 0.74
SNX4-204ENST00000473417 SOX4Q06945 474 aaPredicted RBP19.65■□□□□ 0.74
SNX4-204ENST00000473417 FAM26FQ5R3K3 315 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 DCLRE1AQ6PJP8 1040 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 CD300LGQ6UXG3 332 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 FMR1NBQ8N0W7 255 aaPredicted RBP19.65■□□□□ 0.74
SNX4-204ENST00000473417 C3orf58Q8NDZ4 430 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 PRSS33Q8NF86 280 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 PRKD2Q9BZL6 878 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 EXOC7Q9UPT5 735 aa19.65■□□□□ 0.74
SNX4-204ENST00000473417 KLRC4O43908 158 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 ZMYND10O75800 440 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 B3GAT3O94766 335 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 KCNE1P15382 129 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 EHHADHQ08426 723 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 ALCAMQ13740 583 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 IER5LQ5T953 404 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 SYCP3Q8IZU3 236 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 ENGASEQ8NFI3 743 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 ZMAT2Q96NC0 199 aaKnown RBP19.64■□□□□ 0.73
SNX4-204ENST00000473417 ACAP3Q96P50 834 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 SLC38A7Q9NVC3 462 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 CNTN3Q9P232 1028 aa19.64■□□□□ 0.73
SNX4-204ENST00000473417 MEFVO15553 781 aaPredicted RBP19.63■□□□□ 0.73
SNX4-204ENST00000473417 ADAM12O43184 909 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 MRE11P49959 708 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 PTPN5P54829 565 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 FAM160A1Q05DH4 1040 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 SNW1Q13573 536 aaKnown RBP19.63■□□□□ 0.73
SNX4-204ENST00000473417 KMT5BQ4FZB7 885 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 STXBP4Q6ZWJ1 553 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 MSTO1Q9BUK6 570 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 KCNK12Q9HB15 430 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 PIDD1Q9HB75 910 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 SLC39A2Q9NP94 309 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 MTRRQ9UBK8 725 aa19.63■□□□□ 0.73
SNX4-204ENST00000473417 TSC2P49815 1807 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 A0A0B4J269 797 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 MYL1P05976 194 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 TNFSF9P41273 254 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 TDGQ13569 410 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 ZBTB41Q5SVQ8 909 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 LIN9Q5TKA1 542 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 SLFN12LQ6IEE8 588 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 DDX27Q96GQ7 796 aaKnown RBP19.62■□□□□ 0.73
SNX4-204ENST00000473417 CCDC34Q96HJ3 373 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 MYADMQ96S97 322 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 TMEM206Q9H813 350 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 EXOC1Q9NV70 894 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 IGSF9Q9P2J2 1179 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 EPS15L1Q9UBC2 864 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 DUSP12Q9UNI6 340 aa19.62■□□□□ 0.73
SNX4-204ENST00000473417 I3L4J1 428 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 PODXLO00592 558 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 OGTO15294 1046 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 TRAPPC3O43617 180 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 RPN1P04843 607 aaKnown RBP19.61■□□□□ 0.73
SNX4-204ENST00000473417 HNRNPA1P09651 372 aaKnown RBP eCLIP19.61■□□□□ 0.73
SNX4-204ENST00000473417 TKTP29401 623 aaKnown RBP19.61■□□□□ 0.73
SNX4-204ENST00000473417 AVPR2P30518 371 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 HOXA9P31269 272 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 GBP2P32456 591 aaPredicted RBP19.61■□□□□ 0.73
SNX4-204ENST00000473417 BRCC3P46736 316 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 DPYDQ12882 1025 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 RAB33AQ14088 237 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 SLC10A6Q3KNW5 377 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 EPM2AIP1Q7L775 607 aaPredicted RBP19.61■□□□□ 0.73
SNX4-204ENST00000473417 POMGNT1Q8WZA1 660 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 STYXL1Q9Y6J8 313 aa19.61■□□□□ 0.73
SNX4-204ENST00000473417 EIF3DO15371 548 aaKnown RBP eCLIP19.6■□□□□ 0.73
SNX4-204ENST00000473417 PRPF40AO75400 957 aaKnown RBP19.6■□□□□ 0.73
SNX4-204ENST00000473417 C8AP07357 584 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 CLTAP09496 248 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 CXCL8P10145 99 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 ADSSP30520 456 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 OR1D2P34982 312 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 POSTNQ15063 836 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 RSPO2Q6UXX9 243 aaPredicted RBP19.6■□□□□ 0.73
SNX4-204ENST00000473417 ANKS3Q6ZW76 656 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 NELFCDQ8IXH7 590 aa19.6■□□□□ 0.73
SNX4-204ENST00000473417 ZNF507Q8TCN5 953 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms