RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 C11orf70Q9BRQ4 267 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 RXFP1Q9HBX9 757 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 PXMP2Q9NR77 195 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 TCEA3O75764 348 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 ALADP13716 330 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 TCF4P15884 667 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 DSG3P32926 999 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 ACOT2P49753 483 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 MGAT5Q09328 741 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 ATP13A4Q4VNC1 1196 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 MIEF2Q96C03 454 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 BICD1Q96G01 975 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 FBXL18Q96ME1 805 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 XPNPEP1Q9NQW7 623 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 EXOC7Q9UPT5 735 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 USTQ9Y2C2 406 aa22.43■■□□□ 1.18
COL18A1-207ENST00000473212 CD58P19256 250 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 ZBTB41Q5SVQ8 909 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 GLIS1Q8NBF1 620 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 CCHCR1Q8TD31 782 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 L3MBTL3Q96JM7 780 aaPredicted RBP22.42■■□□□ 1.18
COL18A1-207ENST00000473212 MAGEB18Q96M61 343 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 NKIRAS1Q9NYS0 192 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL18A1-207ENST00000473212 WNT10BO00744 389 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 BAATQ14032 418 aaPredicted RBP22.42■■□□□ 1.18
COL18A1-207ENST00000473212 HP1BP3Q5SSJ5 553 aaPredicted RBP22.42■■□□□ 1.18
COL18A1-207ENST00000473212 ARHGEF16Q5VV41 709 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 ARHGEF18Q6ZSZ5 1173 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 MCF2L2Q86YR7 1114 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 ARHGEF3Q9NR81 526 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 LGALS13Q9UHV8 139 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 FZD1Q9UP38 647 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 WDR81Q562E7 1941 aa22.42■■□□□ 1.18
COL18A1-207ENST00000473212 PLSCR1O15162 318 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 CDH16O75309 829 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 ECM2O94769 699 aaPredicted RBP22.41■■□□□ 1.18
COL18A1-207ENST00000473212 SEZ6Q53EL9 994 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 SWSAP1Q6NVH7 229 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 ZNF365Q70YC5 407 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 ZBTB45Q96K62 511 aaPredicted RBP22.41■■□□□ 1.18
COL18A1-207ENST00000473212 PLCD4Q9BRC7 762 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 KLHL14Q9P2G3 628 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 NEU2Q9Y3R4 380 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 UMODL1Q5DID0 1318 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 TBC1D12O60347 775 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 STBD1O95210 358 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 FOXN2P32314 431 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 SLC1A1P43005 524 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 NLRP11P59045 1033 aaKnown RBP22.41■■□□□ 1.18
COL18A1-207ENST00000473212 MCCD1P59942 119 aaPredicted RBP22.41■■□□□ 1.18
COL18A1-207ENST00000473212 MTMR2Q13614 643 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 TMEM63BQ5T3F8 832 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 IZUMO3Q5VZ72 239 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
COL18A1-207ENST00000473212 GPD1LQ8N335 351 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 RSRC1Q96IZ7 334 aaKnown RBP22.41■■□□□ 1.18
COL18A1-207ENST00000473212 IFT74Q96LB3 600 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 PAIP2Q9BPZ3 127 aaKnown RBP22.41■■□□□ 1.18
COL18A1-207ENST00000473212 ADAM33Q9BZ11 813 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 C15orf41Q9Y2V0 281 aa22.41■■□□□ 1.18
COL18A1-207ENST00000473212 GSTTP1A0A1W2PQM5 241 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 PI4K2BG5E9Z4 385 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 SSR1P43307 286 aaKnown RBP22.4■■□□□ 1.18
COL18A1-207ENST00000473212 MKRN3Q13064 507 aaKnown RBP22.4■■□□□ 1.18
COL18A1-207ENST00000473212 KLF1Q13351 362 aaPredicted RBP22.4■■□□□ 1.18
COL18A1-207ENST00000473212 FAM47EQ6ZV65 393 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 HAPLN2Q9GZV7 340 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 AVENQ9NQS1 362 aaPredicted RBP22.4■■□□□ 1.18
COL18A1-207ENST00000473212 RGS20O76081 388 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 TAC1P20366 129 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 CENPCQ03188 943 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 TMED2Q15363 201 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 MTFR1Q15390 333 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 TDRD10Q5VZ19 366 aaKnown RBP22.4■■□□□ 1.18
COL18A1-207ENST00000473212 CYP4F22Q6NT55 531 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 ASRGL1Q7L266 308 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 TMC2Q8TDI7 906 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 ATG4CQ96DT6 458 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 FAM212AQ96EL1 285 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 MOV10L1Q9BXT6 1211 aaKnown RBP22.4■■□□□ 1.18
COL18A1-207ENST00000473212 APOBEC3GQ9HC16 384 aaKnown RBP22.4■■□□□ 1.18
COL18A1-207ENST00000473212 C1orf112Q9NSG2 853 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 KIAA1217Q5T5P2 1943 aa22.4■■□□□ 1.18
COL18A1-207ENST00000473212 RASA4BC9J798 803 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 RASA4O43374 803 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 MSH2P43246 934 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 STRN3Q13033 797 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 NAA25Q14CX7 972 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 ECHDC2Q86YB7 292 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 CCDC60Q8IWA6 550 aaPredicted RBP22.39■■□□□ 1.18
COL18A1-207ENST00000473212 ANKLE1Q8NAG6 615 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 CCDC77Q9BR77 488 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 ANKEF1Q9NU02 776 aa22.39■■□□□ 1.18
COL18A1-207ENST00000473212 SEPT9Q9UHD8 586 aaPredicted RBP22.39■■□□□ 1.18
COL18A1-207ENST00000473212 A0A1B0GUA9 196 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 WDR46O15213 610 aaKnown RBP22.39■■□□□ 1.17
COL18A1-207ENST00000473212 HLA-DRAP01903 254 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 FDX1P10109 184 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 KRT10P13645 584 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms