RNA–Protein interactions for RNA: ENST00000472921.1

CCDC13-204, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 314 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-204ENST00000472921 ARHGEF19Q8IW93 802 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 LRRC8AQ8IWT6 810 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 CPLX3Q8WVH0 158 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 TATDN2Q93075 761 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 TOP1MTQ969P6 601 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
CCDC13-204ENST00000472921 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
CCDC13-204ENST00000472921 ZFP42Q96MM3 310 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 APOBEC3GQ9HC16 384 aaKnown RBP12.95□□□□□ -0.34
CCDC13-204ENST00000472921 ABHD10Q9NUJ1 306 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 GDAP2Q9NXN4 497 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 AGAP1Q9UPQ3 857 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 R3HCC1Q9Y3T6 440 aaKnown RBP12.95□□□□□ -0.34
CCDC13-204ENST00000472921 NUB1Q9Y5A7 615 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 FHOD1Q9Y613 1164 aa12.95□□□□□ -0.34
CCDC13-204ENST00000472921 POLR2BP30876 1174 aaKnown RBP12.94□□□□□ -0.34
CCDC13-204ENST00000472921 SCNN1GP51170 649 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 NOP14P78316 857 aaKnown RBP12.94□□□□□ -0.34
CCDC13-204ENST00000472921 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
CCDC13-204ENST00000472921 DSC1Q08554 894 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 MYO1EQ12965 1108 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 TUSC3Q13454 348 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 GLRA4Q5JXX5 417 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 C16orf59Q7L2K0 433 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 LIMS2Q7Z4I7 341 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 URGCPQ8TCY9 931 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 SHC3Q92529 594 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 BADQ92934 168 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 HPDLQ96IR7 371 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 KREMEN1Q96MU8 473 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 CASD1Q96PB1 797 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 PI4K2AQ9BTU6 479 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 BCO2Q9BYV7 579 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 CYP3A43Q9HB55 503 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 LRFN2Q9ULH4 789 aa12.94□□□□□ -0.34
CCDC13-204ENST00000472921 LRRC53A6NM62 1247 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 RBAK-RBAKDNI3L0D1 243 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 EVI5O60447 810 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 FGBP02675 491 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 AMHP03971 560 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 PTMAP06454 111 aaKnown RBP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 KRT19P08727 400 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 CCDC172P0C7W6 258 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 P4HA1P13674 534 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 PRKCIP41743 596 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 STAT1P42224 750 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 FPGSQ05932 587 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 LRMPQ12912 555 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 CUL2Q13617 745 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 DRAP1Q14919 205 aaPredicted RBP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 UPP1Q16831 310 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 TSR1Q2NL82 804 aaKnown RBP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 ZNF699Q32M78 642 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 ZNF667Q5HYK9 610 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 WDR59Q6PJI9 974 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 RRAGAQ7L523 313 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 IRF2BP2Q7Z5L9 587 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 C7orf61Q8IZ16 206 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 PPM1KQ8N3J5 372 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 TTC39CQ8N584 583 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 UBR7Q8N806 425 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 RNF169Q8NCN4 708 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 CCDC112Q8NEF3 446 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 ZNF689Q96CS4 500 aaPredicted RBP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 ZNF560Q96MR9 790 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 SPAG5Q96R06 1193 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 MRPL9Q9BYD2 267 aaKnown RBP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 NIF3L1Q9GZT8 377 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 NLRC4Q9NPP4 1024 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 AJAP1Q9UKB5 411 aaPredicted RBP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 BZW2Q9Y6E2 419 aaKnown RBP12.93□□□□□ -0.34
CCDC13-204ENST00000472921 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
CCDC13-204ENST00000472921 F8VZ95 297 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 TMEM189-UBE2V1I3L0A0 370 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
CCDC13-204ENST00000472921 FOXN3O00409 490 aaPredicted RBP12.92□□□□□ -0.34
CCDC13-204ENST00000472921 DGKIO75912 1065 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 FERP16591 822 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 ACO1P21399 889 aaKnown RBP12.92□□□□□ -0.34
CCDC13-204ENST00000472921 SOX5P35711 763 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC13-204ENST00000472921 TAF6P49848 677 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 GUCY2FP51841 1108 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 LILRA4P59901 499 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
CCDC13-204ENST00000472921 YWHAEP62258 255 aaKnown RBP12.92□□□□□ -0.34
CCDC13-204ENST00000472921 WDR72Q3MJ13 1102 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 SFMBT2Q5VUG0 894 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 SPOPLQ6IQ16 392 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 PSRC1Q6PGN9 363 aaPredicted RBP12.92□□□□□ -0.34
CCDC13-204ENST00000472921 DCLRE1AQ6PJP8 1040 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 TMTC1Q8IUR5 882 aa12.92□□□□□ -0.34
CCDC13-204ENST00000472921 TMEM139Q8IV31 216 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms