RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 SLC43A3Q8NBI5 491 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 ATP8B4Q8TF62 1192 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 DYDC1Q8WWB3 177 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 TBC1D5Q92609 795 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 FAM136AQ96C01 138 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 RUNDC3BQ96NL0 473 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 TSPYL2Q9H2G4 693 aaPredicted RBP10.77□□□□□ -0.69
APTX-216ENST00000472896 EPB41L4BQ9H329 900 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 ARMT1Q9H993 441 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 RIC8AQ9NPQ8 531 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 SH3GLB2Q9NR46 395 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 ATP8A2Q9NTI2 1148 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 ZDHHC18Q9NUE0 388 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 DLGAP2Q9P1A6 1054 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 STOML1Q9UBI4 398 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 ANAPC4Q9UJX5 808 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 INTUQ9ULD6 942 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 PACSIN2Q9UNF0 486 aaPredicted RBP10.77□□□□□ -0.69
APTX-216ENST00000472896 ARIH1Q9Y4X5 557 aaPredicted RBP10.77□□□□□ -0.69
APTX-216ENST00000472896 GMEB1Q9Y692 573 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 SLC4A4Q9Y6R1 1079 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 NAV1Q8NEY1 1877 aa10.77□□□□□ -0.69
APTX-216ENST00000472896 PRRC2BQ5JSZ5 2229 aaKnown RBP10.76□□□□□ -0.69
APTX-216ENST00000472896 ASTN1O14525 1302 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 TNKSO95271 1327 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 MAGEA13PA6NCF6 341 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 EPOPA6NHQ4 379 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 TLR3O15455 904 aaKnown RBP10.76□□□□□ -0.69
APTX-216ENST00000472896 HNRNPCL1O60812 293 aaKnown RBP10.76□□□□□ -0.69
APTX-216ENST00000472896 PRDM1O75626 825 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 PCP11498 1178 aaKnown RBP10.76□□□□□ -0.69
APTX-216ENST00000472896 POLE2P56282 527 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 PTENP60484 403 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 ASIC1P78348 528 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 KLHL30Q0D2K2 578 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 KCNMA1Q12791 1236 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 STK4Q13043 487 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 SKIV2LQ15477 1246 aaKnown RBP10.76□□□□□ -0.69
APTX-216ENST00000472896 CKAP2Q8WWK9 683 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 NCSTNQ92542 709 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 CCDC17Q96LX7 622 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 RPS6KC1Q96S38 1066 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 ZKSCAN3Q9BRR0 538 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 ERP44Q9BS26 406 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 AP1M1Q9BXS5 423 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 KATNBL1Q9H079 304 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 TRPV6Q9H1D0 765 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 WNT8AQ9H1J5 351 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 HIPK3Q9H422 1215 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 DCLRE1BQ9H816 532 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 PIDD1Q9HB75 910 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 ETNK1Q9HBU6 452 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 PCMTD2Q9NV79 361 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 MTRF1LQ9UGC7 380 aaKnown RBP10.76□□□□□ -0.69
APTX-216ENST00000472896 MTCH2Q9Y6C9 303 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 MCM3APO60318 1980 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 CNTNAP5Q8WYK1 1306 aa10.76□□□□□ -0.69
APTX-216ENST00000472896 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 TLDC2A0PJX2 215 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 TCP11X1B4DZS4 312 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 NVLO15381 856 aaKnown RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 MBD4O95243 580 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 GNA14O95837 355 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 SHBGP04278 402 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 PDHA1P08559 390 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 SCG2P13521 617 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 COPB2P35606 906 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 VHLP40337 213 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 TUBP50607 506 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 NKX3-2P78367 333 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 SETDB1Q15047 1291 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 GSTA3Q16772 222 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 C12orf60Q5U649 245 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 SNRNP48Q6IEG0 339 aaKnown RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 CXCL17Q6UXB2 119 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 PEX26Q7Z412 305 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 FITM2Q8N6M3 262 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 PTPRN2Q92932 1015 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.75□□□□□ -0.69
APTX-216ENST00000472896 DPH5Q9H2P9 285 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 CERS4Q9HA82 394 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 NLRC4Q9NPP4 1024 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 NKX1-2Q9UD57 310 aaPredicted RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 USP20Q9Y2K6 914 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 DAAM1Q9Y4D1 1078 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 PCDHA11Q9Y5I1 949 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 A0A087X0T9 212 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 FAM86C2PA6NEL3 165 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 USP17L12C9JPN9 530 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 USP17L21D6R901 530 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 RASGRF2O14827 1237 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 RAD21O60216 631 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 ARHGEF15O94989 841 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 FAM228BP0C875 321 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 POU3F3P20264 500 aaPredicted RBP10.75□□□□□ -0.69
APTX-216ENST00000472896 RFC5P40937 340 aa10.75□□□□□ -0.69
APTX-216ENST00000472896 IFI35P80217 286 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms