RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 USP41Q3LFD5 358 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 TIGD5Q53EQ6 642 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 PDXDC1Q6P996 788 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 CD300LGQ6UXG3 332 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 TRAPPC11Q7Z392 1133 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 VPS52Q8N1B4 723 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 ENOX1Q8TC92 643 aaKnown RBP21.57■■□□□ 1.04
SF1-213ENST00000472725 SRRTQ9BXP5 876 aaKnown RBP21.57■■□□□ 1.04
SF1-213ENST00000472725 NAT10Q9H0A0 1025 aaKnown RBP21.57■■□□□ 1.04
SF1-213ENST00000472725 ZBP1Q9H171 429 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 CHST7Q9NS84 486 aa21.57■■□□□ 1.04
SF1-213ENST00000472725 RFXAPO00287 272 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 FSCN2O14926 492 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 SYN3O14994 580 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 TAF6P49848 677 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 CAMK1Q14012 370 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 SMC1AQ14683 1233 aaKnown RBP21.56■■□□□ 1.04
SF1-213ENST00000472725 TPD52L1Q16890 204 aaPredicted RBP21.56■■□□□ 1.04
SF1-213ENST00000472725 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.56■■□□□ 1.04
SF1-213ENST00000472725 C3orf58Q8NDZ4 430 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 OR5B17Q8NGF7 314 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 CXorf38Q8TB03 319 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 PLEKHO2Q8TD55 490 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 PPP2R3CQ969Q6 453 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 SUSD3Q96L08 255 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 GUCD1Q96NT3 240 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 CACNG4Q9UBN1 327 aa21.56■■□□□ 1.04
SF1-213ENST00000472725 PTPRJQ12913 1337 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 FSD2A1L4K1 749 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 C4BPAP04003 597 aaKnown RBP21.55■■□□□ 1.04
SF1-213ENST00000472725 ITGB3P05106 788 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 PRKCSHP14314 528 aaPredicted RBP21.55■■□□□ 1.04
SF1-213ENST00000472725 DNAJB1P25685 340 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 GUCY2FP51841 1108 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 LILRA4P59901 499 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 SV2CQ496J9 727 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 CCDC40Q4G0X9 1142 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 TMC7Q7Z402 723 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 FAM114A1Q8IWE2 563 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 ZNF516Q92618 1163 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 RABGGTAQ92696 567 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 EEF2KMTQ96G04 330 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 MED15Q96RN5 788 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 POP1Q99575 1024 aaKnown RBP21.55■■□□□ 1.04
SF1-213ENST00000472725 TCF25Q9BQ70 676 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 VN1R3Q9BXE9 311 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 GPR62Q9BZJ7 368 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 THAP9Q9H5L6 903 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 AGAP1Q9UPQ3 857 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 MTCH2Q9Y6C9 303 aa21.55■■□□□ 1.04
SF1-213ENST00000472725 F8W810 466 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 M0QZQ0 153 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 TULP1O00294 542 aaPredicted RBP21.54■■□□□ 1.04
SF1-213ENST00000472725 STAU1O95793 577 aaKnown RBP21.54■■□□□ 1.04
SF1-213ENST00000472725 CAVIN2O95810 425 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 URODP06132 367 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 FGFR3P22607 806 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 POLR2BP30876 1174 aaKnown RBP21.54■■□□□ 1.04
SF1-213ENST00000472725 ATICP31939 592 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 GLUD2P49448 558 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 DSG1Q02413 1049 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 CREMQ03060 361 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 MYO1EQ12965 1108 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 ADGRE1Q14246 886 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 ZACNQ401N2 412 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 TTPALQ9BTX7 342 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 NSUN3Q9H649 340 aaKnown RBP21.54■■□□□ 1.04
SF1-213ENST00000472725 ENTPD7Q9NQZ7 604 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.54■■□□□ 1.04
SF1-213ENST00000472725 MRPL17Q9NRX2 175 aaKnown RBP21.54■■□□□ 1.04
SF1-213ENST00000472725 SIX4Q9UIU6 781 aa21.54■■□□□ 1.04
SF1-213ENST00000472725 SCN1AP35498 2009 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 PHACTR2O75167 634 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 ERVFC1P60507 584 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 DLG4P78352 724 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 TRPC3Q13507 836 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 C1orf220Q5T0J3 134 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 FAM171A1Q5VUB5 890 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 LMBRD2Q68DH5 695 aaPredicted RBP21.53■■□□□ 1.04
SF1-213ENST00000472725 KIAA1841Q6NSI8 718 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 C15orf39Q6ZRI6 1047 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 MRPL43Q8N983 215 aaKnown RBP21.53■■□□□ 1.04
SF1-213ENST00000472725 APPL2Q8NEU8 664 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 MICAL1Q8TDZ2 1067 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 HASPINQ8TF76 798 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 MYLIPQ8WY64 445 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 BPIFA3Q9BQP9 254 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 FUCA2Q9BTY2 467 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 OXCT2Q9BYC2 517 aaPredicted RBP21.53■■□□□ 1.04
SF1-213ENST00000472725 TMEM8AQ9HCN3 771 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 PCDHB8Q9UN66 801 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 CHD7Q9P2D1 2997 aa21.53■■□□□ 1.04
SF1-213ENST00000472725 KPNA7A9QM74 516 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 PMM2O15305 246 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 CXCL14O95715 111 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 C1RP00736 705 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 KRT19P08727 400 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 FOSL2P15408 326 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 TYMPP19971 482 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 IGFBP4P22692 258 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms