RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SV2CQ496J9 727 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 C1orf220Q5T0J3 134 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 DCLRE1AQ6PJP8 1040 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 C1orf127Q8N9H9 656 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 GSTCDQ8NEC7 633 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 TET1Q8NFU7 2136 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 NEK11Q8NG66 645 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 TAS1R2Q8TE23 839 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 HASPINQ8TF76 798 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 ZNF558Q96NG5 402 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 NT5C1BQ96P26 610 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 PI4K2AQ9BTU6 479 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 LSM14BQ9BX40 385 aaKnown RBP11.33□□□□□ -0.6
UBE2F-220ENST00000472479 PCDHB12Q9Y5F1 795 aa11.33□□□□□ -0.6
UBE2F-220ENST00000472479 A0A1B0GTH6 734 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 CARNS1A5YM72 827 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 NT5C1B-RDH14C9J2C7 533 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 MEFVO15553 781 aaPredicted RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TEX33O43247 280 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TRAPPC3O43617 180 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 HUS1O60921 280 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 LAG3P18627 525 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 ATICP31939 592 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 CA8P35219 290 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 BCAR1P56945 870 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 CLDN10P78369 228 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 SOX4Q06945 474 aaPredicted RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 NR1I3Q14994 352 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 WDR72Q3MJ13 1102 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 CACNA2D4Q7Z3S7 1137 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 COLGALT2Q8IYK4 626 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TDHQ8IZJ6 230 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 PPM1KQ8N3J5 372 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TMEM175Q9BSA9 504 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 INTS2Q9H0H0 1204 aaKnown RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 CACNG4Q9UBN1 327 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 DNAJB4Q9UDY4 337 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 GTPBP10A4D1E9 387 aaKnown RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 GOLGA6L6A8MZA4 724 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 NRP1O14786 923 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 INPPL1O15357 1258 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 ADCY5O95622 1261 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TRIM21P19474 475 aaKnown RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 SLC9A1P19634 815 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 LRPAP1P30533 357 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 BMP8BP34820 402 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 SLC11A1P49279 550 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 CLCN6P51797 869 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 KRT17Q04695 432 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 PTPN21Q16825 1174 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 SARM1Q6SZW1 724 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 KCNT2Q6UVM3 1135 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 METTL23Q86XA0 190 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 CEP57Q86XR8 500 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TMEM130Q8N3G9 435 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 LRRC52Q8N7C0 313 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TAF4BQ92750 862 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 ZNF689Q96CS4 500 aaPredicted RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 TMEM169Q96HH4 297 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 DNAI2Q9GZS0 605 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 UBE2TQ9NPD8 197 aaPredicted RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 FAM207AQ9NSI2 230 aaPredicted RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 SNX9Q9Y5X1 595 aa11.32□□□□□ -0.6
UBE2F-220ENST00000472479 MRPL42Q9Y6G3 142 aaKnown RBP11.32□□□□□ -0.6
UBE2F-220ENST00000472479 KPNA7A9QM74 516 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 PIRO00625 290 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 VNN1O95497 513 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 GALTP07902 379 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 PAX3P23760 479 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 CTNNB1P35222 781 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 PBX3P40426 434 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 USP8P40818 1118 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 ZNF75DP51815 510 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 MFAP3P55082 362 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 RAPGEF1Q13905 1077 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 RAB30Q15771 203 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 UPP1Q16831 310 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 ARHGAP44Q17R89 818 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 TSR1Q2NL82 804 aaKnown RBP11.31□□□□□ -0.6
UBE2F-220ENST00000472479 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 SPOPLQ6IQ16 392 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 KIAA1841Q6NSI8 718 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 SCARA5Q6ZMJ2 495 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 RRAGAQ7L523 313 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 CRIPAKQ8N1N5 446 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 CPLX3Q8WVH0 158 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 ELMO3Q96BJ8 720 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 PAAF1Q9BRP4 392 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 SPG21Q9NZD8 308 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 PUF60Q9UHX1 559 aaKnown RBP11.31□□□□□ -0.6
UBE2F-220ENST00000472479 SIX4Q9UIU6 781 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 MTUS1Q9ULD2 1270 aa11.31□□□□□ -0.6
UBE2F-220ENST00000472479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms