RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 MICU3Q86XE3 530 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 RAB11FIP4Q86YS3 637 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 MB21D2Q8IYB1 491 aaPredicted RBP11.35□□□□□ -0.59
CDHR3-209ENST00000472116 REXO1Q8N1G1 1221 aaKnown RBP11.35□□□□□ -0.59
CDHR3-209ENST00000472116 TMEM143Q96AN5 459 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 ACDQ96AP0 544 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 TMEM87BQ96K49 555 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 CEP89Q96ST8 783 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 THG1LQ9NWX6 298 aaKnown RBP11.35□□□□□ -0.59
CDHR3-209ENST00000472116 BARHL2Q9NY43 387 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 PPME1Q9Y570 386 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 KIAA1549LQ6ZVL6 1849 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
CDHR3-209ENST00000472116 PRC1O43663 620 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 OPHN1O60890 802 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 RNF40O75150 1001 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 ATF2P15336 505 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 ENGP17813 658 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 MCM5P33992 734 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 RFC5P40937 340 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 PSMC5P62195 406 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 MAPK6Q16659 721 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 PLA2G4FQ68DD2 849 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 PIP4P1Q86T03 277 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 TCEAL8Q8IYN2 117 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 CCDC12Q8WUD4 166 aaPredicted RBP11.34□□□□□ -0.59
CDHR3-209ENST00000472116 CRYGNQ8WXF5 182 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 ZFYVE19Q96K21 471 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 CEP170P1Q96L14 293 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 C6orf50Q9HD87 102 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 RBM28Q9NW13 759 aaKnown RBP11.34□□□□□ -0.59
CDHR3-209ENST00000472116 SNTG2Q9NY99 539 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 EBF1Q9UH73 591 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 TPCN1Q9ULQ1 816 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 STK24Q9Y6E0 443 aa11.34□□□□□ -0.59
CDHR3-209ENST00000472116 ZNF462Q96JM2 2506 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 SH2B2O14492 632 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 ATXN7O15265 892 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 MSH4O15457 936 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 ARHGAP6O43182 974 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 B3GAT3O94766 335 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 PRKCBP05771 671 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 CIITAP33076 1130 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 ABCG1P45844 678 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 TWF1Q12792 350 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 MXD4Q14582 209 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 FBXO43Q4G163 708 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 TPGS2Q68CL5 300 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 SLC8B1Q6J4K2 584 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 CCNI2Q6ZMN8 369 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 SYT13Q7L8C5 426 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 FERMT3Q86UX7 667 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 ARID3BQ8IVW6 561 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 TSTD1Q8NFU3 115 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 EXOC6Q8TAG9 804 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 ADAMTS14Q8WXS8 1223 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 SLC5A5Q92911 643 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 GTPBP2Q9BX10 602 aaKnown RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
CDHR3-209ENST00000472116 NCANO14594 1321 aa11.33□□□□□ -0.6
CDHR3-209ENST00000472116 HECTD1Q9ULT8 2610 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 COL6A6A6NMZ7 2263 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 H7C4K7 107 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 C1QL1O75973 258 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 ABLIM3O94929 683 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 CFIP05156 583 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 ARF4P18085 180 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-209ENST00000472116 DRD1P21728 446 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 TKTP29401 623 aaKnown RBP11.32□□□□□ -0.6
CDHR3-209ENST00000472116 LIFRP42702 1097 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 PTENP60484 403 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 PSMD2Q13200 908 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 DMC1Q14565 340 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 EMC2Q15006 297 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 TMEM132AQ24JP5 1023 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 ARHGAP15Q53QZ3 475 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 TMEM196Q5HYL7 178 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 FSTL4Q6MZW2 842 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 ANO5Q75V66 913 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 LSM14AQ8ND56 463 aaKnown RBP11.32□□□□□ -0.6
CDHR3-209ENST00000472116 BPIFB1Q8TDL5 484 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 CCDC136Q96JN2 1154 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 SPACA7Q96KW9 195 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 CLMPQ9H6B4 373 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 OBP2AQ9NY56 170 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
CDHR3-209ENST00000472116 APOBEC2Q9Y235 224 aaKnown RBP11.32□□□□□ -0.6
CDHR3-209ENST00000472116 PTPRDP23468 1912 aa11.32□□□□□ -0.6
CDHR3-209ENST00000472116 TENM4Q6N022 2769 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 A0A1W2PRU2 124 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms