RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 ANO6Q4KMQ2 910 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 FAM102AQ5T9C2 384 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-208ENST00000471910 AGAP9Q5VTM2 703 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 SRGAP1Q7Z6B7 1085 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 PDSS2Q86YH6 399 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 TNPO1Q92973 898 aaKnown RBP5.9□□□□□ -1.46
CDHR3-208ENST00000471910 PNKPQ96T60 521 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 SIK2Q9H0K1 926 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 TMEM60Q9H2L4 133 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 ARMT1Q9H993 441 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 SLAMF7Q9NQ25 335 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 ZDHHC8Q9ULC8 765 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 PCDHA1Q9Y5I3 950 aa5.9□□□□□ -1.46
CDHR3-208ENST00000471910 FRMPD2Q68DX3 1309 aaPredicted RBP5.9□□□□□ -1.47
CDHR3-208ENST00000471910 FAM227AF5H4B4 570 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 GNAI2P04899 355 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 MYBP10242 640 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 FOXE3Q13461 319 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
CDHR3-208ENST00000471910 GBX1Q14549 363 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 SPDYE7PQ495Y7 208 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 KHDC1LQ5JSQ8 128 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 CCDC181Q5TID7 509 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 NPNTQ6UXI9 565 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 OVCH2Q7RTZ1 564 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 FAM90A1Q86YD7 464 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 SYNE4Q8N205 404 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF276Q8N554 614 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 OR56A1Q8NGH5 318 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 C1orf43Q9BWL3 253 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 MRPL46Q9H2W6 279 aaKnown RBP5.89□□□□□ -1.47
CDHR3-208ENST00000471910 RNF181Q9P0P0 153 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 CEP72Q9P209 647 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 MYRFQ9Y2G1 1151 aa5.89□□□□□ -1.47
CDHR3-208ENST00000471910 A0A1B0GTW7 788 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 CAPN8A6NHC0 703 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 GRXCR1A8MXD5 290 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF185O15231 689 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 ERN1O75460 977 aaKnown RBP5.88□□□□□ -1.47
CDHR3-208ENST00000471910 GJB1P08034 283 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 KCNJ5P48544 419 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 AGFG1P52594 562 aaKnown RBP5.88□□□□□ -1.47
CDHR3-208ENST00000471910 RAB1AP62820 205 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 PDCD4Q53EL6 469 aaKnown RBP5.88□□□□□ -1.47
CDHR3-208ENST00000471910 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 METRNLQ641Q3 311 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 ARMC6Q6NXE6 501 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 SPRED1Q7Z699 444 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 ZFPM1Q8IX07 1006 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 SLC17A8Q8NDX2 589 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 SLC25A43Q8WUT9 341 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-208ENST00000471910 DDX17Q92841 729 aaKnown RBP5.88□□□□□ -1.47
CDHR3-208ENST00000471910 MED15Q96RN5 788 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 B3GNT5Q9BYG0 378 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF341Q9BYN7 854 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 IMPG2Q9BZV3 1241 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 KLHL11Q9NVR0 708 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 NOX1Q9Y5S8 564 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 FPGT-TNNI3KV9GXZ4 949 aa5.88□□□□□ -1.47
CDHR3-208ENST00000471910 A0A1W2PPL8 197 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 AHRRA9YTQ3 701 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 GPANK1O95872 356 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 CHEK2O96017 543 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 C1SP09871 688 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 RARBP10826 455 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 INSRRP14616 1297 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 LAG3P18627 525 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 SLC6A4P31645 630 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 PTGS2P35354 604 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 BUD31P41223 144 aaPredicted RBP5.87□□□□□ -1.47
CDHR3-208ENST00000471910 CACNB3P54284 484 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 NOMO3P69849 1222 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 PIGFQ07326 219 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 ZNF844Q08AG5 666 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 TUBA3CQ13748 450 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 KIF22Q14807 665 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 LLGL1Q15334 1064 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 ZXDCQ2QGD7 858 aaPredicted RBP5.87□□□□□ -1.47
CDHR3-208ENST00000471910 NOMO2Q5JPE7 1267 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 TUBA3EQ6PEY2 450 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 CCDC149Q6ZUS6 474 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 DGKHQ86XP1 1220 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 MAPKAPK5Q8IW41 473 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 FAM43AQ8N2R8 423 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 SCAMP4Q969E2 229 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 TTC17Q96AE7 1141 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 MARS2Q96GW9 593 aaKnown RBP5.87□□□□□ -1.47
CDHR3-208ENST00000471910 LRFN3Q9BTN0 628 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 AKIP1Q9NQ31 210 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 PIH1D1Q9NWS0 290 aaKnown RBP5.87□□□□□ -1.47
CDHR3-208ENST00000471910 CPA4Q9UI42 421 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 PCDHA6Q9UN73 950 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 MTO1Q9Y2Z2 717 aaKnown RBP5.87□□□□□ -1.47
CDHR3-208ENST00000471910 CHST2Q9Y4C5 530 aa5.87□□□□□ -1.47
CDHR3-208ENST00000471910 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 PHGDHO43175 533 aaKnown RBP5.86□□□□□ -1.47
CDHR3-208ENST00000471910 PRSS23O95084 383 aa5.86□□□□□ -1.47
CDHR3-208ENST00000471910 PSMC1P62191 440 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms