RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PARVAQ9NVD7 372 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 GRHL1Q9NZI5 618 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 TELO2Q9Y4R8 837 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 MROH7Q68CQ1 1323 aa11.33□□□□□ -0.6
APLF-204ENST00000471727 MYO1CO00159 1063 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 MSCO60682 206 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 GAS8O95995 478 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 PAEPP09466 180 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 OSBPP22059 807 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 RRM1P23921 792 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 RPL21P46778 160 aaKnown RBP11.32□□□□□ -0.6
APLF-204ENST00000471727 ATP1A2P50993 1020 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 ZNF132P52740 706 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 PDCLQ13371 301 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 PPP1R7Q15435 360 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 PTGISQ16647 500 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 TTC27Q6P3X3 843 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 TMEM270Q6UE05 265 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
APLF-204ENST00000471727 KATNAL2Q8IYT4 538 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 ANKRD13AQ8IZ07 590 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 UBR7Q8N806 425 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 EXD1Q8NHP7 514 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 FBXO25Q8TCJ0 367 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
APLF-204ENST00000471727 CPA5Q8WXQ8 436 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 TLCD1Q96CP7 247 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
APLF-204ENST00000471727 BTBD6Q96KE9 485 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 ACO2Q99798 780 aaKnown RBP11.32□□□□□ -0.6
APLF-204ENST00000471727 FOXP3Q9BZS1 431 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 HAPLN2Q9GZV7 340 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 CCDC113Q9H0I3 377 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 CENPHQ9H3R5 247 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 APOBEC3GQ9HC16 384 aaKnown RBP11.32□□□□□ -0.6
APLF-204ENST00000471727 ANKFY1Q9P2R3 1169 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 IP6K2Q9UHH9 426 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 FZD1Q9UP38 647 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
APLF-204ENST00000471727 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 HBP1O60381 514 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 PRKCBP05771 671 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 CCT5P48643 541 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 CORO7P57737 925 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 POU5F1BQ06416 359 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 PPIL2Q13356 520 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 PTK6Q13882 451 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 PRKG1Q13976 671 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 CCNG2Q16589 344 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 CELF3Q5SZQ8 465 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 LRRC38Q5VT99 294 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 LMBRD2Q68DH5 695 aaPredicted RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 AADACL2Q6P093 401 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 TMEM35BQ8NCS4 154 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 FEZF2Q8TBJ5 459 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 CCHCR1Q8TD31 782 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 GPR20Q99678 358 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 TCHPQ9BT92 498 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 SMARCAD1Q9H4L7 1026 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 MROH8Q9H579 483 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 BCCIPQ9P287 314 aaKnown RBP eCLIP11.31□□□□□ -0.6
APLF-204ENST00000471727 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 KCNH4Q9UQ05 1017 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 SPDYE5A6NIY4 337 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 ACKR2O00590 384 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 SORBS3O60504 671 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 IL18RAPO95256 599 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 FAM107AO95990 144 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 AGTP01019 485 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 COPS2P61201 443 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 LAMTOR4Q0VGL1 99 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 MAMLD1Q13495 774 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 TRPC3Q13507 836 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 KCTD2Q14681 263 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 KYAT1Q16773 422 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 DHX37Q8IY37 1157 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 RCOR2Q8IZ40 523 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 OR2W6PQ8NHA6 318 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 ZNF606Q8WXB4 792 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 SNF8Q96H20 258 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 RBM41Q96IZ5 413 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 NFKBIZQ9BYH8 718 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 DCLK3Q9C098 648 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 NIF3L1Q9GZT8 377 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 ASCC2Q9H1I8 757 aaPredicted RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 CHORDC1Q9UHD1 332 aaPredicted RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 SLC12A6Q9UHW9 1150 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
APLF-204ENST00000471727 PCDHGC3Q9UN70 934 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 CEP83Q9Y592 693 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 NUB1Q9Y5A7 615 aa11.31□□□□□ -0.6
APLF-204ENST00000471727 WDR81Q562E7 1941 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms