RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 HNRNPDLO14979 420 aaKnown RBP20.52■□□□□ 0.88
COMMD1-207ENST00000471704 CCL16O15467 120 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 CFHP08603 1231 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 PKP1Q13835 747 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 FOXD4L5Q5VV16 416 aaPredicted RBP20.52■□□□□ 0.88
COMMD1-207ENST00000471704 ANKS3Q6ZW76 656 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 SLC7A14Q8TBB6 771 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 FOXD4L4Q8WXT5 416 aaPredicted RBP20.52■□□□□ 0.88
COMMD1-207ENST00000471704 RTP3Q9BQQ7 232 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 STRA6Q9BX79 667 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 ST6GALNAC4Q9H4F1 302 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 CDH7Q9ULB5 785 aa20.52■□□□□ 0.88
COMMD1-207ENST00000471704 DMDP11532 3685 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 A0A0B4J269 797 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 TBC1D4O60343 1298 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 XYLBO75191 536 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 PPP1R37O75864 691 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 RPL9P32969 192 aaKnown RBP20.51■□□□□ 0.87
COMMD1-207ENST00000471704 NBL1P41271 181 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 MATR3P43243 847 aaKnown RBP eCLIP20.51■□□□□ 0.87
COMMD1-207ENST00000471704 ZBTB6Q15916 424 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 ENOX2Q16206 610 aaKnown RBP20.51■□□□□ 0.87
COMMD1-207ENST00000471704 SLC8B1Q6J4K2 584 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 CCDC105Q8IYK2 499 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 RPP25Q9BUL9 199 aaKnown RBP20.51■□□□□ 0.87
COMMD1-207ENST00000471704 PANK2Q9BZ23 570 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 SLC2A4RGQ9NR83 387 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 NUMBLQ9Y6R0 609 aa20.51■□□□□ 0.87
COMMD1-207ENST00000471704 FAM186AA6NE01 2351 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 OGTO15294 1046 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 GFRA3O60609 400 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 ABLIM3O94929 683 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 ADRB2P07550 413 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 CLTAP09496 248 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 SCP2P22307 547 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 TXLNAP40222 546 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 MRPL58Q14197 206 aaKnown RBP20.5■□□□□ 0.87
COMMD1-207ENST00000471704 STK38Q15208 465 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 ZNF720Q7Z2F6 126 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 FGF13Q92913 245 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 FGF14Q92915 247 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 PLEKHA5Q9HAU0 1116 aa20.5■□□□□ 0.87
COMMD1-207ENST00000471704 DNMT3BQ9UBC3 853 aaKnown RBP20.5■□□□□ 0.87
COMMD1-207ENST00000471704 LACTBL1A8MY62 500 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 SYN3O14994 580 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 SPTLC2O15270 562 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 PPP6R2O75170 966 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 ZSCAN22P10073 491 aaPredicted RBP20.49■□□□□ 0.87
COMMD1-207ENST00000471704 KCNA1Q09470 495 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 VARS2Q5ST30 1063 aaKnown RBP20.49■□□□□ 0.87
COMMD1-207ENST00000471704 PARM1Q6UWI2 310 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 CCDC73Q6ZRK6 1079 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 SV2BQ7L1I2 683 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 PDILTQ8N807 584 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 DTWD2Q8NBA8 298 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 SPRYD3Q8NCJ5 442 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 ST13P5Q8NFI4 369 aaPredicted RBP20.49■□□□□ 0.87
COMMD1-207ENST00000471704 ZNF461Q8TAF7 563 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 ITFG1Q8TB96 612 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 GPR152Q8TDT2 470 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 FGFBP2Q9BYJ0 223 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 HCFC1R1Q9NWW0 138 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 CPSF3Q9UKF6 684 aaKnown RBP20.49■□□□□ 0.87
COMMD1-207ENST00000471704 KCNH3Q9ULD8 1083 aa20.49■□□□□ 0.87
COMMD1-207ENST00000471704 ARHGEF37A1IGU5 675 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 FRMD3A2A2Y4 597 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 F13A1P00488 732 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 LRPAP1P30533 357 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 STAT6P42226 847 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 GUCY2FP51841 1108 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 CASP5P51878 434 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 ROR1Q01973 937 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 E2F4Q16254 413 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 PHLDB3Q6NSJ2 640 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 KIF12Q96FN5 646 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 MSTO1Q9BUK6 570 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 CA14Q9ULX7 337 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 POLIQ9UNA4 740 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 STYXL1Q9Y6J8 313 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 SCN1AP35498 2009 aa20.48■□□□□ 0.87
COMMD1-207ENST00000471704 TCHHQ07283 1943 aa20.47■□□□□ 0.87
COMMD1-207ENST00000471704 YEATS4O95619 227 aa20.47■□□□□ 0.87
COMMD1-207ENST00000471704 PPP2R3AQ06190 1150 aa20.47■□□□□ 0.87
COMMD1-207ENST00000471704 FOXD4L6Q3SYB3 417 aaPredicted RBP20.47■□□□□ 0.87
COMMD1-207ENST00000471704 SHC4Q6S5L8 630 aa20.47■□□□□ 0.87
COMMD1-207ENST00000471704 FOXD4L3Q6VB84 417 aaPredicted RBP20.47■□□□□ 0.87
COMMD1-207ENST00000471704 SUSD3Q96L08 255 aa20.47■□□□□ 0.87
COMMD1-207ENST00000471704 ZNF396Q96N95 335 aaPredicted RBP20.47■□□□□ 0.87
COMMD1-207ENST00000471704 TBC1D17Q9HA65 648 aa20.47■□□□□ 0.87
COMMD1-207ENST00000471704 AVENQ9NQS1 362 aaPredicted RBP20.47■□□□□ 0.87
COMMD1-207ENST00000471704 TBC1D7Q9P0N9 293 aa20.47■□□□□ 0.87
COMMD1-207ENST00000471704 WDR27A2RRH5 827 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 PPEF2O14830 753 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 ATF2P15336 505 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 ADSSP30520 456 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 ACOT2P49753 483 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 GPC5P78333 572 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 KYAT1Q16773 422 aa20.46■□□□□ 0.87
COMMD1-207ENST00000471704 PABPC1LQ4VXU2 614 aaKnown RBP20.46■□□□□ 0.87
COMMD1-207ENST00000471704 CRELD2Q6UXH1 353 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms