RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 LEXMQ3ZCV2 418 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 RTP2Q5QGT7 225 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 EP400NLQ6ZTU2 488 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 CEP57Q86XR8 500 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 RDH13Q8NBN7 331 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 SLC22A17Q8WUG5 538 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 CASP10Q92851 521 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 B3GALT6Q96L58 329 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 MFSD14AQ96MC6 490 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 MAN1B1Q9UKM7 699 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 BRWD1Q9NSI6 2320 aa16.54■□□□□ 0.24
SDC3-203ENST00000471567 M0QZQ0 153 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 TEX28O15482 410 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 GLP2RO95838 553 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 KCNA5P22460 613 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 RPL13P26373 211 aaKnown RBP16.53■□□□□ 0.24
SDC3-203ENST00000471567 PRCPP42785 496 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 NDUFV1P49821 464 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 CYP24A1Q07973 514 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 EDRF1Q3B7T1 1238 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 PUS10Q3MIT2 529 aaKnown RBP16.53■□□□□ 0.24
SDC3-203ENST00000471567 ZCWPW2Q504Y3 356 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 ANKS3Q6ZW76 656 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 WDR49Q8IV35 697 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 SMYD4Q8IYR2 804 aaPredicted RBP16.53■□□□□ 0.24
SDC3-203ENST00000471567 VN1R2Q8NFZ6 395 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 LNX1Q8TBB1 728 aaPredicted RBP16.53■□□□□ 0.24
SDC3-203ENST00000471567 INTS13Q9NVM9 706 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 CLEC1BQ9P126 229 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 PCDHB8Q9UN66 801 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 HCFC2Q9Y5Z7 792 aa16.53■□□□□ 0.24
SDC3-203ENST00000471567 I3L4J1 428 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 MAPK13O15264 365 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 TBX10O75333 385 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 TMEM191BP0C7N4 346 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 TKTP29401 623 aaKnown RBP16.52■□□□□ 0.24
SDC3-203ENST00000471567 PNPLA4P41247 253 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 CLCN4P51793 760 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 LILRA4P59901 499 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 TFF2Q03403 129 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 DLX2Q07687 328 aaPredicted RBP16.52■□□□□ 0.24
SDC3-203ENST00000471567 STIM1Q13586 685 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 PSMD5Q16401 504 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 DUOXA2Q1HG44 320 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 CENPPQ6IPU0 288 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 PRSS55Q6UWB4 352 aaPredicted RBP16.52■□□□□ 0.24
SDC3-203ENST00000471567 ADSSL1Q8N142 457 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 TMEM130Q8N3G9 435 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 APPL2Q8NEU8 664 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 ANKRD36BP1Q96IX9 119 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 MSLNLQ96KJ4 702 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 ASB2Q96Q27 587 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 FNBP1Q96RU3 617 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 KIAA1468Q9P260 1216 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 BACE2Q9Y5Z0 518 aa16.52■□□□□ 0.24
SDC3-203ENST00000471567 ARHGEF37A1IGU5 675 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 H7C4K7 107 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 TULP1O00294 542 aaPredicted RBP16.51■□□□□ 0.23
SDC3-203ENST00000471567 PPEF2O14830 753 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 TNNC2P02585 160 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 HOXB8P17481 243 aaPredicted RBP16.51■□□□□ 0.23
SDC3-203ENST00000471567 NR2F2P24468 414 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 TAF6P49848 677 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 RBP5P82980 135 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 MORC3Q14149 939 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 MRPL58Q14197 206 aaKnown RBP16.51■□□□□ 0.23
SDC3-203ENST00000471567 ANKRD54Q6NXT1 300 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 LLGL2Q6P1M3 1020 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 DSTYKQ6XUX3 929 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 LRRC52Q8N7C0 313 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 C1orf127Q8N9H9 656 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 TRIML1Q8N9V2 468 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 DHTKD1Q96HY7 919 aaPredicted RBP16.51■□□□□ 0.23
SDC3-203ENST00000471567 ZNF560Q96MR9 790 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 CGRRF1Q99675 332 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 CLSTN2Q9H4D0 955 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 DZANK1Q9NVP4 752 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 MTRRQ9UBK8 725 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 DPP7Q9UHL4 492 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 CD207Q9UJ71 328 aa16.51■□□□□ 0.23
SDC3-203ENST00000471567 BARX2Q9UMQ3 279 aaPredicted RBP16.51■□□□□ 0.23
SDC3-203ENST00000471567 H3BQ06 376 aaPredicted RBP16.5■□□□□ 0.23
SDC3-203ENST00000471567 PSMA7O14818 248 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 GLUD1P00367 558 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 DLATP10515 647 aaKnown RBP16.5■□□□□ 0.23
SDC3-203ENST00000471567 EPCAMP16422 314 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 TNNI1P19237 187 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 TYMPP19971 482 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 CASP4P49662 377 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 AP3M2P53677 418 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
SDC3-203ENST00000471567 ADAM9Q13443 819 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 CAMK4Q16566 473 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 VARS2Q5ST30 1063 aaKnown RBP16.5■□□□□ 0.23
SDC3-203ENST00000471567 ELMSAN1Q6PJG2 1045 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 CSGALNACT2Q8N6G5 542 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
SDC3-203ENST00000471567 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms