RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 TBC1D4O60343 1298 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 IL18RAPO95256 599 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 URODP06132 367 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 CD44P16070 742 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 RPL9P32969 192 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 CASP4P49662 377 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 PMS1P54277 932 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 MRPS5P82675 430 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 CYP24A1Q07973 514 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 MRPL58Q14197 206 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 SNRNP35Q16560 246 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 LEXMQ3ZCV2 418 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 C1orf220Q5T0J3 134 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 C9orf57Q5W0N0 161 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 LILRA6Q6PI73 481 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 STXBP4Q6ZWJ1 553 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 SLC9A9Q8IVB4 645 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 CD302Q8IX05 232 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 ELOA2Q8IYF1 753 aaPredicted RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 GUF1Q8N442 669 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 SMRP1Q8NCR6 262 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 ATXN2LQ8WWM7 1075 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 RIN2Q8WYP3 895 aaPredicted RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 BORCS6Q96GS4 357 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 SUSD3Q96L08 255 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 NECAB3Q96P71 396 aaPredicted RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 POP1Q99575 1024 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 TTPALQ9BTX7 342 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 MTMR12Q9C0I1 747 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 S1PR5Q9H228 398 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 MRPL17Q9NRX2 175 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 MAN1B1Q9UKM7 699 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 DERAQ9Y315 318 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 ARIH1Q9Y4X5 557 aaPredicted RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 WDFY4Q6ZS81 3184 aa7.4□□□□□ -1.23
PSMD4-210ENST00000470396 DOCK8Q8NF50 2099 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 NOTCH4Q99466 2003 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 ZNF233A6NK53 670 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 M0QZQ0 153 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 KIAA0391O15091 583 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 TGM5O43548 720 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 NCK2O43639 380 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 KINO60870 393 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 LDHAP00338 332 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 NR3C1P04150 777 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 SPATA31D3P0C874 917 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 IL9P15248 144 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 CA8P35219 290 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 PRCPP42785 496 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 NDUFV1P49821 464 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 LILRA4P59901 499 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 SNRPFP62306 86 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 TFAMQ00059 246 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 PSMD5Q16401 504 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 COBLL1Q53SF7 1204 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 VARS2Q5ST30 1063 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 ISM2Q6H9L7 571 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 ANKRD54Q6NXT1 300 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 EP400NLQ6ZTU2 488 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 SPATA31D4Q6ZUB0 917 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 HS2ST1Q7LGA3 356 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 CEP57Q86XR8 500 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 GLYCTKQ8IVS8 523 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 GPR65Q8IYL9 337 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 C12orf76Q8N812 135 aaPredicted RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 XXYLT1Q8NBI6 393 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 RDH13Q8NBN7 331 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 BEST2Q8NFU1 509 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 GPT2Q8TD30 523 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 NOC3LQ8WTT2 800 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 SUSD6Q92537 303 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 ZNF516Q92618 1163 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 PPP2R3CQ969Q6 453 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 EEF2KMTQ96G04 330 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 MFSD14AQ96MC6 490 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 GSDMAQ96QA5 445 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 TSPAN18Q96SJ8 248 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 INTS13Q9NVM9 706 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 DPP3Q9NY33 737 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 FNIP2Q9P278 1114 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 CGNQ9P2M7 1197 aaKnown RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 MTRRQ9UBK8 725 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 STK39Q9UEW8 545 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 TRAF3IP3Q9Y228 551 aa7.39□□□□□ -1.23
PSMD4-210ENST00000470396 TIMM13Q9Y5L4 95 aaPredicted RBP7.39□□□□□ -1.23
PSMD4-210ENST00000470396 DENND4AQ7Z401 1863 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 DMDP11532 3685 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 TRIM49BA6NDI0 452 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 LRRIQ3A6PVS8 624 aaPredicted RBP7.38□□□□□ -1.23
PSMD4-210ENST00000470396 PPP1R3GB7ZBB8 358 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 BIN1O00499 593 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 SYN3O14994 580 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 MBTPS2O43462 519 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 RFPL2O75678 378 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 AKAP3O75969 853 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 PAPLNO95428 1278 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 VNN2O95498 520 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 ITGB3P05106 788 aa7.38□□□□□ -1.23
PSMD4-210ENST00000470396 WEE2P0C1S8 567 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms