RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 VPS45Q9NRW7 570 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 BARHL2Q9NY43 387 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 GDE1Q9NZC3 331 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 INVSQ9Y283 1065 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 USP20Q9Y2K6 914 aa9.13□□□□□ -0.95
LSM2-210ENST00000470086 ATXN2Q99700 1313 aaKnown RBP9.12□□□□□ -0.95
LSM2-210ENST00000470086 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
LSM2-210ENST00000470086 MYBPHLA2RUH7 354 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 EML1O00423 815 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 PSMD10O75832 226 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 VNN2O95498 520 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 NPTXRO95502 500 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 TDP2O95551 362 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 CCDC192P0DO97 292 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 CEACAM1P13688 526 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 ARF4P18085 180 aaPredicted RBP9.12□□□□□ -0.95
LSM2-210ENST00000470086 HOXA6P31267 233 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 BRCC3P46736 316 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 FGD1P98174 961 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 CREB5Q02930 508 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 MBTD1Q05BQ5 628 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 LAMTOR4Q0VGL1 99 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 TEAD2Q15562 447 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 LARP1BQ659C4 914 aaKnown RBP9.12□□□□□ -0.95
LSM2-210ENST00000470086 CHCHD4Q8N4Q1 142 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 RIN3Q8TB24 985 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 SHKBP1Q8TBC3 707 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 ZSCAN18Q8TBC5 510 aaPredicted RBP9.12□□□□□ -0.95
LSM2-210ENST00000470086 ASAP3Q8TDY4 903 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 IRF7Q92985 503 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 ZC3H10Q96K80 434 aaKnown RBP9.12□□□□□ -0.95
LSM2-210ENST00000470086 LZTS2Q9BRK4 669 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 COLEC11Q9BWP8 271 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 OSBPL3Q9H4L5 887 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 ZFP14Q9HCL3 533 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 TRPV5Q9NQA5 729 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 CEP72Q9P209 647 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 BRPF3Q9ULD4 1205 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 PCDHGA5Q9Y5G8 931 aa9.12□□□□□ -0.95
LSM2-210ENST00000470086 MYOFQ9NZM1 2061 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 ARHGEF37A1IGU5 675 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 OTOL1A6NHN0 477 aaPredicted RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 PYCARD-AS1I3L0S3 204 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 TADA2AO75478 443 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 PRAMEF12O95522 483 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 FOSP01100 380 aaPredicted RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 CSRP1P21291 193 aaKnown RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 FGFR3P22607 806 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 U2AF2P26368 475 aaKnown RBP eCLIP9.11□□□□□ -0.95
LSM2-210ENST00000470086 CIITAP33076 1130 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 CREMQ03060 361 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 SCAPQ12770 1279 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 CAPSQ13938 189 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 LRRC32Q14392 662 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 SART3Q15020 963 aaKnown RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 UAP1L1Q3KQV9 507 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 XKR3Q5GH77 459 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 LRCH2Q5VUJ6 765 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 FSTL4Q6MZW2 842 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 APOA5Q6Q788 366 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 NFXL1Q6ZNB6 911 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 MARCH9Q86YJ5 346 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 TMC8Q8IU68 726 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 FANCBQ8NB91 859 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 RNF149Q8NC42 400 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 OR2I1PQ8NGU4 316 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 HNRNPLLQ8WVV9 542 aaKnown RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 SMARCD2Q92925 531 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 LRIG1Q96JA1 1093 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 CSRNP2Q9H175 543 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 CRISPLD1Q9H336 500 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 DHX33Q9H6R0 707 aaKnown RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 FBRSL1Q9HCM7 1045 aaKnown RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 NRBP2Q9NSY0 501 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 TCEAL9Q9UHQ7 104 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 RAXQ9Y2V3 346 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 INSL5Q9Y5Q6 135 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 RBM8AQ9Y5S9 174 aaKnown RBP9.11□□□□□ -0.95
LSM2-210ENST00000470086 MYLKQ15746 1914 aa9.11□□□□□ -0.95
LSM2-210ENST00000470086 SPENQ96T58 3664 aaKnown RBP9.1□□□□□ -0.95
LSM2-210ENST00000470086 CCDC69A6NI79 296 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 ZNF263O14978 683 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 MEFVO15553 781 aaPredicted RBP9.1□□□□□ -0.95
LSM2-210ENST00000470086 GAS7O60861 476 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 CAVIN2O95810 425 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 PLA2G2AP14555 144 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 GNAQP50148 359 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 IRX4P78413 519 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 FCHO2Q0JRZ9 810 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 TUSC3Q13454 348 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 GLRA4Q5JXX5 417 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 MIER3Q7Z3K6 550 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 SRGAP1Q7Z6B7 1085 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 MFSD6LQ8IWD5 586 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 DAGLBQ8NCG7 672 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 DEPDC1BQ8WUY9 529 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 POLR3CQ9BUI4 534 aaPredicted RBP9.1□□□□□ -0.95
LSM2-210ENST00000470086 TEKT3Q9BXF9 490 aa9.1□□□□□ -0.95
LSM2-210ENST00000470086 LRRC3Q9BY71 257 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms