RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 SV2CQ496J9 727 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 KRT39Q6A163 491 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 SMYD5Q6GMV2 418 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 KIAA1841Q6NSI8 718 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 FUT10Q6P4F1 479 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 DPH6Q7L8W6 267 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 C1orf127Q8N9H9 656 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 CCDC150Q8NCX0 1101 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 SPATA18Q8TC71 538 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 POF1BQ8WVV4 589 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 SUSD3Q96L08 255 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 GAS2L1Q99501 681 aaPredicted RBP13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 TMEM8AQ9HCN3 771 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 CHST7Q9NS84 486 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 MARCH5Q9NX47 278 aa13.62□□□□□ -0.23
SPTLC1-204ENST00000469778 TDRD15B5MCY1 1934 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 SYCE3A1L190 88 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 LRRIQ3A6PVS8 624 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 NT5C1B-RDH14C9J2C7 533 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 RBAK-RBAKDNI3L0D1 243 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 M0QZQ0 153 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 KIF4AO95239 1232 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 FGFR3P22607 806 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 MYL5Q02045 173 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 DSG1Q02413 1049 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 SMC1AQ14683 1233 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 SV2AQ7L0J3 742 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 MRPL43Q8N983 215 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 CXorf38Q8TB03 319 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 ZNF516Q92618 1163 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 MED15Q96RN5 788 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 POP1Q99575 1024 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 TTPALQ9BTX7 342 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 FUCA2Q9BTY2 467 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 HERC2P3Q9BVR0 1158 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 MTMR12Q9C0I1 747 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 FAM124BQ9H5Z6 455 aaPredicted RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 GDAP2Q9NXN4 497 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 AGAP1Q9UPQ3 857 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
SPTLC1-204ENST00000469778 KPNA7A9QM74 516 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 H7C4K7 107 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 TULP1O00294 542 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 GRM6O15303 877 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 ITGB3P05106 788 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 URODP06132 367 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 P4HA1P13674 534 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 TYMPP19971 482 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 PBX3P40426 434 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 GLUD2P49448 558 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 ZNF165P49910 485 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 WNT7BP56706 349 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 BIRC3Q13489 604 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 TIGD5Q53EQ6 642 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 FAM171A1Q5VUB5 890 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 CD300LGQ6UXG3 332 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 ANKS3Q6ZW76 656 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 TMC7Q7Z402 723 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 TRIM59Q8IWR1 403 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 TMEM86AQ8N2M4 240 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 OR5B17Q8NGF7 314 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 PLEKHO2Q8TD55 490 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 MICAL1Q8TDZ2 1067 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 GBF1Q92538 1859 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 SLC35C1Q96A29 364 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 EEF2KMTQ96G04 330 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 HPDLQ96IR7 371 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 CDCA3Q99618 268 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 PAAF1Q9BRP4 392 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 IMPG2Q9BZV3 1241 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 PRDM12Q9H4Q4 367 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 CERS4Q9HA82 394 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 MTMR10Q9NXD2 777 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 PCDHB8Q9UN66 801 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 COQ4Q9Y3A0 265 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 NFE2L3Q9Y4A8 694 aa13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.6□□□□□ -0.23
SPTLC1-204ENST00000469778 GTPBP10A4D1E9 387 aaKnown RBP13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 FSCN2O14926 492 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 HUS1O60921 280 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 OAZ2O95190 189 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 CXCL14O95715 111 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 CYP11A1P05108 521 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 TPM2P07951 284 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 KRT19P08727 400 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 ODC1P11926 461 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms