RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 MIEF2Q96C03 454 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 PGBD4Q96DM1 585 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 APIPQ96GX9 242 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 PHACTR3Q96KR7 559 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 RBM15Q96T37 977 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS8-220ENST00000469713 MPHOSPH6Q99547 160 aaKnown RBP5.14□□□□□ -1.59
VPS8-220ENST00000469713 P2RX7Q99572 595 aaKnown RBP5.14□□□□□ -1.59
VPS8-220ENST00000469713 BRD9Q9H8M2 597 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 RSAD1Q9HA92 442 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 RTEL1Q9NZ71 1219 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 FAM30AQ9NZY2 134 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 POGKQ9P215 609 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 ZDHHC8Q9ULC8 765 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 PHTF1Q9UMS5 762 aa5.14□□□□□ -1.59
VPS8-220ENST00000469713 DRGXA6NNA5 263 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 MYO1FO00160 1098 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 TBX3O15119 743 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 AGFG2O95081 481 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 GJB1P08034 283 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 IFIT2P09913 472 aaKnown RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 COMTP21964 271 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 CHN2P52757 468 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 RABGGTBP53611 331 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 PSMC1P62191 440 aaKnown RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 HHEXQ03014 270 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 ICAM4Q14773 271 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 KIF22Q14807 665 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 BRD3Q15059 726 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 VPS72Q15906 364 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 UTP14CQ5TAP6 766 aaKnown RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 EMC10Q5UCC4 262 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 DRICH1Q6PGQ1 229 aaPredicted RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 Q6ZRM9 215 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 MED25Q71SY5 747 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 KRT78Q8N1N4 520 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 ANKRD35Q8N283 1001 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 FITM2Q8N6M3 262 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 PCSK9Q8NBP7 692 aaKnown RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 DNERQ8NFT8 737 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 TBC1D15Q8TC07 691 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 PMM1Q92871 262 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 STRBPQ96SI9 672 aaKnown RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 TBCBQ99426 244 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 LRRC27Q9C0I9 530 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 NUP62CLQ9H1M0 184 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 PIH1D1Q9NWS0 290 aaKnown RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.13□□□□□ -1.59
VPS8-220ENST00000469713 CFAP97Q9P2B7 532 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 CLCA2Q9UQC9 943 aa5.13□□□□□ -1.59
VPS8-220ENST00000469713 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS8-220ENST00000469713 ZNF785A8K8V0 405 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 ZNF623O75123 536 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 PRSS23O95084 383 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 RARBP10826 455 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 BRAFP15056 766 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 ACO1P21399 889 aaKnown RBP5.12□□□□□ -1.59
VPS8-220ENST00000469713 PIK3CBP42338 1070 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 KCNJ5P48544 419 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 SUMO3P55854 103 aaPredicted RBP5.12□□□□□ -1.59
VPS8-220ENST00000469713 LONRF1Q17RB8 773 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 DCAF17Q5H9S7 520 aaPredicted RBP5.12□□□□□ -1.59
VPS8-220ENST00000469713 METTL24Q5JXM2 366 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 MAMDC4Q6UXC1 1216 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 C11orf96Q7Z7L8 435 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 GSPT2Q8IYD1 628 aaKnown RBP5.12□□□□□ -1.59
VPS8-220ENST00000469713 TMIEQ8NEW7 156 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 WWC2-AS2Q96NR7 200 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 RPS6KC1Q96S38 1066 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 BDH2Q9BUT1 245 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 TRIM54Q9BYV2 358 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 KIAA1586Q9HCI6 787 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 KLHL11Q9NVR0 708 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 RLIMQ9NVW2 624 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 CPNE7Q9UBL6 633 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 CORO2BQ9UQ03 480 aa5.12□□□□□ -1.59
VPS8-220ENST00000469713 KLRG2A4D1S0 409 aaPredicted RBP5.11□□□□□ -1.59
VPS8-220ENST00000469713 LEFTY2O00292 366 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 EN2P19622 333 aaPredicted RBP5.11□□□□□ -1.59
VPS8-220ENST00000469713 MGAT1P26572 445 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 SCNN1GP51170 649 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 ALDH5A1P51649 535 aaPredicted RBP5.11□□□□□ -1.59
VPS8-220ENST00000469713 ARFIP2P53365 341 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 BIRC2Q13490 618 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 CNGA2Q16280 664 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 NOMO2Q5JPE7 1267 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 PDSS2Q86YH6 399 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 ZFPM1Q8IX07 1006 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 SAMD3Q8N6K7 520 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 AOPEPQ8N6M6 819 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 KBTBD7Q8WVZ9 684 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 PHKBQ93100 1093 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 FAM89AQ96GI7 184 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 KLHL32Q96NJ5 620 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 NEU1Q99519 415 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 MNTQ99583 582 aa5.11□□□□□ -1.59
VPS8-220ENST00000469713 ELAC2Q9BQ52 826 aaKnown RBP5.11□□□□□ -1.59
VPS8-220ENST00000469713 GPR87Q9BY21 358 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms