RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 TBK1Q9UHD2 729 aa9.55□□□□□ -0.88
SMARCE1-207ENST00000469334 POLIQ9UNA4 740 aa9.55□□□□□ -0.88
SMARCE1-207ENST00000469334 TNS3Q68CZ2 1445 aa9.55□□□□□ -0.88
SMARCE1-207ENST00000469334 NPHP3-ACAD11A0A0J9YXS1 232 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 DENRO43583 198 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 ADCY3O60266 1144 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 TBC1D12O60347 775 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 PDE8BO95263 885 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 TFAP2AP05549 437 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 ACTN1P12814 892 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 SLC5A1P13866 664 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 SLC9A1P19634 815 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 S100A1P23297 94 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 POLD1P28340 1107 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 NEK2P51955 445 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 RELAQ04206 551 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 ZBTB16Q05516 673 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 KRT81Q14533 505 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 TNIP1Q15025 636 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 EPHA7Q15375 998 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 PUM3Q15397 648 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 SIX1Q15475 284 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 KCTD19Q17RG1 926 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 USP41Q3LFD5 358 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 TMEM119Q4V9L6 283 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 LDHAL6AQ6ZMR3 332 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 RNF207Q6ZRF8 634 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 RAPH1Q70E73 1250 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 CENPUQ71F23 418 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 TREML1Q86YW5 311 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 ERI1Q8IV48 349 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 AHI1Q8N157 1196 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 OLIG1Q8TAK6 271 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 RASGRP4Q8TDF6 673 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 TRPC4APQ8TEL6 797 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 DHRS1Q96LJ7 313 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 PANX3Q96QZ0 392 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 ZNF696Q9H7X3 374 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 SIX2Q9NPC8 291 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 SCHIP1Q9P0W5 487 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 KIAA1522Q9P206 1035 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 ASIC3Q9UHC3 531 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 FAM32AQ9Y421 112 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 CTDP1Q9Y5B0 961 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 ALG6Q9Y672 507 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 IGSF9BQ9UPX0 1349 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 PAPPAQ13219 1627 aa9.54□□□□□ -0.88
SMARCE1-207ENST00000469334 CCDC160A6NGH7 325 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 MINDY4BA8MYZ0 360 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 CASQ2O14958 399 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 MAGEB3O15480 346 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 TYROBPO43914 113 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 MTA2O94776 668 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 CAMTA2O94983 1202 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 TNFAIP8O95379 198 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 BAG2O95816 211 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 ATF2P15336 505 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 PHKG2P15735 406 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 CA4P22748 312 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 SOX5P35711 763 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 TECP42680 631 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 MSLNQ13421 630 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 LRRC41Q15345 812 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 DLGAP5Q15398 846 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 NADK2Q4G0N4 442 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 NEK8Q86SG6 692 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 ULK2Q8IYT8 1036 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 CASP10Q92851 521 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 TTC1Q99614 292 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 SYT11Q9BT88 431 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 C1orf21Q9H246 121 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 KCTD10Q9H3F6 313 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 S100A14Q9HCY8 104 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 CNNM1Q9NRU3 951 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 BMP2KQ9NSY1 1161 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 DDX18Q9NVP1 670 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 HESX1Q9UBX0 185 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 GRID1Q9ULK0 1009 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 STX8Q9UNK0 236 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 PLA2G4CQ9UP65 541 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 PTPN22Q9Y2R2 807 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 RGPD5Q99666 1765 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 MYPNQ86TC9 1320 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 EXOC1LA0A1B0GW35 172 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 FOXO6A8MYZ6 492 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 IPO5O00410 1097 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 TM9SF1O15321 606 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 SLC26A4O43511 780 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 CCNT1O60563 726 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 EIF2S1P05198 315 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 XRCC5P13010 732 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 ITGA8P53708 1063 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 COG7P83436 770 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 CREB5Q02930 508 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 PLEKHG4Q58EX7 1191 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 C1orf146Q5VVC0 180 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 ZDHHC14Q8IZN3 488 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 ICA1LQ8NDH6 482 aa9.53□□□□□ -0.88
SMARCE1-207ENST00000469334 DNAJC19Q96DA6 116 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms