RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 TPGS2Q68CL5 300 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 TSSK4Q6SA08 328 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 MPZL3Q6UWV2 235 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 KCNK18Q7Z418 384 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 SUSD3Q96L08 255 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 ZSWIM3Q96MP5 696 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 MMTAG2Q9BU76 263 aaKnown RBP13.4□□□□□ -0.26
COL5A1-207ENST00000469093 RAB34Q9BZG1 259 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 C17orf75Q9HAS0 396 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 ZSCAN32Q9NX65 697 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 CEP72Q9P209 647 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 MRPS17Q9Y2R5 130 aaKnown RBP13.4□□□□□ -0.26
COL5A1-207ENST00000469093 INSL5Q9Y5Q6 135 aa13.4□□□□□ -0.26
COL5A1-207ENST00000469093 SPTBN2O15020 2390 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 SPTLC1O15269 473 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 EIF5BO60841 1220 aaKnown RBP13.39□□□□□ -0.27
COL5A1-207ENST00000469093 LILRB5O75023 590 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 MOSPD3O75425 235 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 MTAPQ13126 283 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 GRM2Q14416 872 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 SEZ6Q53EL9 994 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 CYP4A22Q5TCH4 519 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 KRT79Q5XKE5 535 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 MAP4K3Q8IVH8 894 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 HS6ST3Q8IZP7 471 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 FAM184AQ8NB25 1140 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 DDX12PQ92771 950 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 DNASE1L2Q92874 299 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 ZSCAN31Q96LW9 406 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-207ENST00000469093 DRC1Q96MC2 740 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 ASB16Q96NS5 453 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 TRMT61BQ9BVS5 477 aaKnown RBP13.39□□□□□ -0.27
COL5A1-207ENST00000469093 BRD9Q9H8M2 597 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 AFF4Q9UHB7 1163 aaKnown RBP13.39□□□□□ -0.27
COL5A1-207ENST00000469093 MIA3Q5JRA6 1907 aa13.39□□□□□ -0.27
COL5A1-207ENST00000469093 LAD1O00515 517 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 MAN2B1O00754 1011 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 TOM1L1O75674 476 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 HARSP12081 509 aaKnown RBP13.38□□□□□ -0.27
COL5A1-207ENST00000469093 GUCY2CP25092 1073 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 MCM4P33991 863 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 PRPHP41219 470 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 TWF1Q12792 350 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 MAMSTRQ6ZN01 415 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-207ENST00000469093 TMEM130Q8N3G9 435 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 TMEM161BQ8NDZ6 487 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 APPL2Q8NEU8 664 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 SPIRE2Q8WWL2 714 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 SMARCD2Q92925 531 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 ZNF512Q96ME7 567 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-207ENST00000469093 TRPV5Q9NQA5 729 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 PRMT8Q9NR22 394 aaPredicted RBP13.38□□□□□ -0.27
COL5A1-207ENST00000469093 PPP4R2Q9NY27 417 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 MAFFQ9ULX9 164 aa13.38□□□□□ -0.27
COL5A1-207ENST00000469093 TPRP12270 2363 aaKnown RBP13.38□□□□□ -0.27
COL5A1-207ENST00000469093 OAZ2O95190 189 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 PLS3P13797 630 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 GJA1P17302 382 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 PSMC3P17980 439 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 MARCKSP29966 332 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-207ENST00000469093 VIPR2P41587 438 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 EPHA5P54756 1037 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 STRN3Q13033 797 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 ZBTB6Q15916 424 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 RSPO4Q2I0M5 234 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-207ENST00000469093 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 VITQ6UXI7 678 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 RNF19BQ6ZMZ0 732 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 IRF7Q92985 503 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 TIPINQ9BVW5 301 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 EPC1Q9H2F5 836 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 PLEKHA5Q9HAU0 1116 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
COL5A1-207ENST00000469093 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.37□□□□□ -0.27
COL5A1-207ENST00000469093 NCDNQ9UBB6 729 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 TUBGCP4Q9UGJ1 667 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 KCNG1Q9UIX4 513 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 NDRG2Q9UN36 371 aaKnown RBP13.37□□□□□ -0.27
COL5A1-207ENST00000469093 PCDHB8Q9UN66 801 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 DMXL1Q9Y485 3027 aa13.37□□□□□ -0.27
COL5A1-207ENST00000469093 M0QZQ0 153 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 CLDN3O15551 220 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 MAPTP10636 758 aaKnown RBP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 MYL4P12829 197 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 TDGF1P13385 188 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 GDI1P31150 447 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 SMTNP53814 917 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 SPAG1Q07617 926 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 MCL1Q07820 350 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 ZRSR1Q15695 479 aaKnown RBP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 ZPBP2Q6X784 338 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 ELMOD1Q8N336 334 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 GPR161Q8N6U8 529 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms