RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CLLU1OSQ5K130 101 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 TDRD10Q5VZ19 366 aaKnown RBP8.75□□□□□ -1.01
HDAC6-216ENST00000468949 SARM1Q6SZW1 724 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 SV2AQ7L0J3 742 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 TRAPPC11Q7Z392 1133 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 EFCAB13Q8IY85 973 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 NEK11Q8NG66 645 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 PHOSPHO2Q8TCD6 241 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 TOP1MTQ969P6 601 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 TTYH1Q9H313 450 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-216ENST00000468949 SLC28A3Q9HAS3 691 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 AAASQ9NRG9 546 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 TUBGCP4Q9UGJ1 667 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 INSL6Q9Y581 213 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 NUB1Q9Y5A7 615 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 PCDHA11Q9Y5I1 949 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 SZT2Q5T011 3432 aa8.75□□□□□ -1.01
HDAC6-216ENST00000468949 A0A1B0GTH6 734 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 GTPBP10A4D1E9 387 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 PODXLO00592 558 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 PTGESO14684 152 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 DGKIO75912 1065 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 HLA-DRAP01903 254 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 FOSL2P15408 326 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 LAG3P18627 525 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 RPL9P32969 192 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 ALDH7A1P49419 539 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 GATMP50440 423 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 WNT7BP56706 349 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 PPP3CAQ08209 521 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 DSG2Q14126 1118 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 ZACNQ401N2 412 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 SV2CQ496J9 727 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 CBWD6Q4V339 395 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 XKR4Q5GH76 650 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 CBWD3Q5JTY5 395 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 MIIPQ5JXC2 388 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 CBWD5Q5RIA9 395 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 PPP2R2DQ66LE6 453 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 ALKAL1Q6UXT8 129 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 HERC6Q8IVU3 1022 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 CMTR2Q8IYT2 770 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 FIBCD1Q8N539 461 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 C1orf127Q8N9H9 656 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 OR5B17Q8NGF7 314 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 PLEKHO2Q8TD55 490 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 C18orf25Q96B23 403 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 BORCS6Q96GS4 357 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 ZMAT2Q96NC0 199 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 NT5C1BQ96P26 610 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 PPP1R10Q96QC0 940 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 CRACR2AQ9BSW2 395 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 LSM14BQ9BX40 385 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 XPO4Q9C0E2 1151 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 DNAI2Q9GZS0 605 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 INTS2Q9H0H0 1204 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 HSD3B7Q9H2F3 369 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 NKX2-4Q9H2Z4 354 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 ZNF576Q9H609 170 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 GOLGA2P5Q9HBQ8 144 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 RNF19AQ9NV58 838 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 TBC1D13Q9NVG8 400 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 RAB20Q9NX57 234 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 AGAP1Q9UPQ3 857 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 YBX2Q9Y2T7 364 aaKnown RBP8.74□□□□□ -1.01
HDAC6-216ENST00000468949 PTPRJQ12913 1337 aa8.74□□□□□ -1.01
HDAC6-216ENST00000468949 LAMA2P24043 3122 aaKnown RBP8.73□□□□□ -1.01
HDAC6-216ENST00000468949 RBAK-RBAKDNI3L0D1 243 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 INPPL1O15357 1258 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TRAPPC3O43617 180 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 B3GAT3O94766 335 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 GJB5O95377 273 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 RFX1P22670 979 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 PAX3P23760 479 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 ATICP31939 592 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 PPM1AP35813 382 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TAF6P49848 677 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 GUCY2FP51841 1108 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 RABGGTBP53611 331 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 YWHAEP62258 255 aaKnown RBP8.73□□□□□ -1.01
HDAC6-216ENST00000468949 NOP14P78316 857 aaKnown RBP8.73□□□□□ -1.01
HDAC6-216ENST00000468949 CLDN10P78369 228 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TRIM14Q14142 442 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 SYCP1Q15431 976 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 SGSM1Q2NKQ1 1148 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 ZNF667Q5HYK9 610 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 C9orf57Q5W0N0 161 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 DSTYKQ6XUX3 929 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 SCARA5Q6ZMJ2 495 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 CACNA2D4Q7Z3S7 1137 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TMCO2Q7Z6W1 182 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-216ENST00000468949 PPFIBP1Q86W92 1011 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 PPM1KQ8N3J5 372 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 LRRC52Q8N7C0 313 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TET1Q8NFU7 2136 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TAS1R2Q8TE23 839 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 MYLIPQ8WY64 445 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TAF4BQ92750 862 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 IQCDQ96DY2 449 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 HPDLQ96IR7 371 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms