RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KIAA0753Q2KHM9 967 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 METTL24Q5JXM2 366 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 PRAMEF14Q5SWL7 426 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 RHOUQ7L0Q8 258 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 DAAM2Q86T65 1068 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 RSPH3Q86UC2 560 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 FAM83AQ86UY5 434 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 C3orf20Q8ND61 904 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 OR52N2Q8NGI0 321 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 LENG9Q96B70 501 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 CYFIP2Q96F07 1278 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 VRK1Q99986 396 aaPredicted RBP6.41□□□□□ -1.38
LSM5-209ENST00000468872 LSM14BQ9BX40 385 aaKnown RBP6.41□□□□□ -1.38
LSM5-209ENST00000468872 SENP6Q9GZR1 1112 aaPredicted RBP6.41□□□□□ -1.38
LSM5-209ENST00000468872 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
LSM5-209ENST00000468872 PCDHA3Q9Y5H8 950 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 DMRT1Q9Y5R6 373 aa6.41□□□□□ -1.38
LSM5-209ENST00000468872 A0A088AWK7 358 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 CAPN8A6NHC0 703 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 RAMP2O60895 175 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 SLC5A1P13866 664 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 PCSK1P29120 753 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 ZNF280AP59817 542 aaPredicted RBP6.4□□□□□ -1.38
LSM5-209ENST00000468872 RAB1AP62820 205 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 NKX6-1P78426 367 aaPredicted RBP6.4□□□□□ -1.38
LSM5-209ENST00000468872 BIRC2Q13490 618 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 MTM1Q13496 603 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 SEMA5AQ13591 1074 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 RAB39AQ14964 217 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 CNN3Q15417 329 aaKnown RBP6.4□□□□□ -1.38
LSM5-209ENST00000468872 VPS72Q15906 364 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 CCDC157Q569K6 752 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 DOK3Q7L591 496 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 HEATR3Q7Z4Q2 680 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 SAMD3Q8N6K7 520 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 MDM1Q8TC05 714 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 CPT1CQ8TCG5 803 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 STON2Q8WXE9 905 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 NT5C1BQ96P26 610 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 AGAP2Q99490 1192 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 MPHOSPH6Q99547 160 aaKnown RBP6.4□□□□□ -1.38
LSM5-209ENST00000468872 TTPALQ9BTX7 342 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 CALCOCO1Q9P1Z2 691 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 POLHQ9Y253 713 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 PCDHGB6Q9Y5F9 930 aa6.4□□□□□ -1.38
LSM5-209ENST00000468872 TRIM24O15164 1050 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 GPR32O75388 356 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 RECQL4O94761 1208 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
LSM5-209ENST00000468872 DDCP20711 480 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 PTPN7P35236 360 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 PTTG1IPP53801 180 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 SNAPC2Q13487 334 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 PICALMQ13492 652 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 RNF220Q5VTB9 566 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 LAIR1Q6GTX8 287 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 DARS2Q6PI48 645 aaKnown RBP6.39□□□□□ -1.39
LSM5-209ENST00000468872 MAEAQ7L5Y9 396 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 ZNF572Q7Z3I7 529 aaPredicted RBP6.39□□□□□ -1.39
LSM5-209ENST00000468872 SYNE4Q8N205 404 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 MLST8Q9BVC4 326 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 NAA15Q9BXJ9 866 aaKnown RBP6.39□□□□□ -1.39
LSM5-209ENST00000468872 CHMP4AQ9BY43 222 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 ARMT1Q9H993 441 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 LMBRD1Q9NUN5 540 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 FZD1Q9UP38 647 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 HDAC5Q9UQL6 1122 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 ACTL7AQ9Y615 435 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 ATRNL1Q5VV63 1379 aa6.39□□□□□ -1.39
LSM5-209ENST00000468872 TMEM191CA6NGB0 347 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 GOLIM4O00461 696 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 FOXN1O15353 648 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 ITGB1P05556 798 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 TYRP14679 529 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 MALP21145 153 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 PLS1Q14651 629 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 BRD3Q15059 726 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 GADL1Q6ZQY3 521 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 XYLT1Q86Y38 959 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 DCBLD1Q8N8Z6 715 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 CASKIN2Q8WXE0 1202 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 SLC35A4Q96G79 324 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 CEP95Q96GE4 821 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 CDC5LQ99459 802 aaKnown RBP6.38□□□□□ -1.39
LSM5-209ENST00000468872 KCNH6Q9H252 994 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 ATP6V0A4Q9HBG4 840 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 TMEM140Q9NV12 185 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 ABCF2Q9UG63 623 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 STAP2Q9UGK3 403 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 EIF2B4Q9UI10 523 aaKnown RBP6.38□□□□□ -1.39
LSM5-209ENST00000468872 ARID4BQ4LE39 1312 aaPredicted RBP6.38□□□□□ -1.39
LSM5-209ENST00000468872 ZMYM3Q14202 1370 aa6.38□□□□□ -1.39
LSM5-209ENST00000468872 NT5C1B-RDH14C9J2C7 533 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 H3BUI4 141 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 TPD52L2O43399 206 aaKnown RBP6.37□□□□□ -1.39
LSM5-209ENST00000468872 PQBP1O60828 265 aaKnown RBP6.37□□□□□ -1.39
LSM5-209ENST00000468872 ARIH2O95376 493 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 MYL3P08590 195 aa6.37□□□□□ -1.39
LSM5-209ENST00000468872 IFIT2P09913 472 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms