RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 I3L4J1 428 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 M0QZQ0 153 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 BIN1O00499 593 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 PSMA7O14818 248 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 SYN3O14994 580 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 SPTLC1O15269 473 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 TBX10O75333 385 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 AKAP3O75969 853 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 PAX3P23760 479 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 TKTP29401 623 aaKnown RBP11.95□□□□□ -0.5
MSH5-212ENST00000467319 MCM4P33991 863 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 GTF2F1P35269 517 aaKnown RBP eCLIP11.95□□□□□ -0.5
MSH5-212ENST00000467319 BRCC3P46736 316 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 NRIP1P48552 1158 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 TFAMQ00059 246 aaKnown RBP11.95□□□□□ -0.5
MSH5-212ENST00000467319 ENPEPQ07075 957 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 CCDC85BQ15834 202 aaPredicted RBP11.95□□□□□ -0.5
MSH5-212ENST00000467319 FAM171A1Q5VUB5 890 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 TTI2Q6NXR4 508 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 OR5B17Q8NGF7 314 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 DHTKD1Q96HY7 919 aaPredicted RBP11.95□□□□□ -0.5
MSH5-212ENST00000467319 TTPALQ9BTX7 342 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 MKNK1Q9BUB5 465 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 MRPL17Q9NRX2 175 aaKnown RBP11.95□□□□□ -0.5
MSH5-212ENST00000467319 DPP3Q9NY33 737 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 VCANP13611 3396 aa11.95□□□□□ -0.5
MSH5-212ENST00000467319 TRIM49BA6NDI0 452 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 LRRIQ3A6PVS8 624 aaPredicted RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 LINC01565O15544 149 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 TRAPPC3O43617 180 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 NCK2O43639 380 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 CLASP2O75122 1294 aaKnown RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 CXCL14O95715 111 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 ITGB3P05106 788 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 CNPP09543 421 aaKnown RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 CCNE1P24864 410 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 RPL13P26373 211 aaKnown RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 LTBRP36941 435 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 LILRA4P59901 499 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 CREMQ03060 361 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 STIM1Q13586 685 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 C1orf220Q5T0J3 134 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 LMBRD2Q68DH5 695 aaPredicted RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 SCARA3Q6AZY7 606 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 ISM2Q6H9L7 571 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 TMEM184AQ6ZMB5 413 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 LRRC52Q8N7C0 313 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 LNX1Q8TBB1 728 aaPredicted RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 TMC2Q8TDI7 906 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 MICAL1Q8TDZ2 1067 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 PARD3BQ8TEW8 1205 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 NOC3LQ8WTT2 800 aaKnown RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 RIN2Q8WYP3 895 aaPredicted RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 BORCS6Q96GS4 357 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 TLE6Q9H808 572 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
MSH5-212ENST00000467319 PRDM6Q9NQX0 595 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
MSH5-212ENST00000467319 FNIP2Q9P278 1114 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 MTRRQ9UBK8 725 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 COG5Q9UP83 839 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 SSX2IPQ9Y2D8 614 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
MSH5-212ENST00000467319 A0A0C4DFX4 3053 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 C2CD2LO14523 706 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 SLC16A3O15427 465 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 TEX28O15482 410 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 TBC1D4O60343 1298 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 C1RP00736 705 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 TMEM191BP0C7N4 346 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 DLATP10515 647 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 POLR2BP30876 1174 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 NDUFV1P49821 464 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 RBM10P98175 930 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 ADAM15Q13444 863 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 BMS1Q14692 1282 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 PSMD5Q16401 504 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 DUOXA2Q1HG44 320 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 CEP135Q66GS9 1140 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 ANKRD40Q6AI12 368 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 PDXDC1Q6P996 788 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 PRSS55Q6UWB4 352 aaPredicted RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 INTS8Q75QN2 995 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 FAM186BQ8IYM0 893 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 SLC22A17Q8WUG5 538 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 CACTINQ8WUQ7 758 aaKnown RBP11.93□□□□□ -0.5
MSH5-212ENST00000467319 PPM1EQ8WY54 764 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 CCDC127Q96BQ5 260 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 ANKRD36BP1Q96IX9 119 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 MSLNLQ96KJ4 702 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 ZNF560Q96MR9 790 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 KLHL5Q96PQ7 755 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 MED15Q96RN5 788 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 FNBP1Q96RU3 617 aa11.93□□□□□ -0.5
MSH5-212ENST00000467319 TSG101Q99816 390 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms