RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 LRRC45Q96CN5 670 aa12.2□□□□□ -0.46
HPS1-208ENST00000467246 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
HPS1-208ENST00000467246 MROH8Q9H579 483 aa12.2□□□□□ -0.46
HPS1-208ENST00000467246 AVENQ9NQS1 362 aaPredicted RBP12.2□□□□□ -0.46
HPS1-208ENST00000467246 CNTN6Q9UQ52 1028 aa12.2□□□□□ -0.46
HPS1-208ENST00000467246 H0YGN5 161 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 OGTO15294 1046 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 THAP12O43422 761 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 ASS1P00966 412 aaKnown RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 TBXAS1P24557 533 aaPredicted RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 CHRNA3P32297 505 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 NOMO3P69849 1222 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 MCL1Q07820 350 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 DHX9Q08211 1270 aaKnown RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 DHX34Q14147 1143 aaKnown RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 TTC19Q6DKK2 380 aaPredicted RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 EFCAB12Q6NXP0 572 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 CCDC137Q6PK04 289 aaKnown RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 TMC3Q7Z5M5 1100 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 SRLQ86TD4 932 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 PACS2Q86VP3 889 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 THNSL1Q8IYQ7 743 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 CEP120Q8N960 986 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 ZC3H15Q8WU90 426 aaKnown RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 UBLCP1Q8WVY7 318 aaPredicted RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 MINDY3Q9H8M7 445 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 CPSF3Q9UKF6 684 aaKnown RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 PPME1Q9Y570 386 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 NFS1Q9Y697 457 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 FAM187AA6NFU0 413 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 INO80B-WBP1J3KQ70 363 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 HSPA6P17066 643 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 KCNJ1P48048 391 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 IGBP1P78318 339 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 EEF1DP3Q658K8 133 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 INO80BQ9C086 356 aaPredicted RBP12.19□□□□□ -0.46
HPS1-208ENST00000467246 SMARCAD1Q9H4L7 1026 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 ADAM22Q9P0K1 906 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 PCYOX1Q9UHG3 505 aa12.19□□□□□ -0.46
HPS1-208ENST00000467246 MYO1FO00160 1098 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 O00370 1275 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 GAS2O43903 313 aaKnown RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 CSDE1O75534 798 aaKnown RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 GJB6O95452 261 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 IQCF3P0C7M6 154 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 MYBL1P10243 752 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 CD58P19256 250 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 PLTPP55058 493 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 TFAMQ00059 246 aaKnown RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ZNF394Q53GI3 561 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 MMS22LQ6ZRQ5 1243 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ARMCX2Q7L311 632 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ZNF606Q8WXB4 792 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 FMO2Q99518 471 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 IMPG2Q9BZV3 1241 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.18□□□□□ -0.46
HPS1-208ENST00000467246 PTPN22Q9Y2R2 807 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ACKR2O00590 384 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 SHOX2O60902 331 aaPredicted RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 GTF2A1P52655 376 aaPredicted RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 SNAPC2Q13487 334 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 DUOXA2Q1HG44 320 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 LDLRAD1Q5T700 205 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ATF7IP2Q5U623 682 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 TMEM192Q8IY95 271 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 TMEM130Q8N3G9 435 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 UBR7Q8N806 425 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 HERPUD2Q9BSE4 406 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 FZD8Q9H461 694 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 PTPRHQ9HD43 1115 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 HBP1O60381 514 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 HOXC6P09630 235 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 WEE2P0C1S8 567 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 PROZP22891 400 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 COILP38432 576 aaPredicted RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 RPL21P46778 160 aaKnown RBP12.18□□□□□ -0.46
HPS1-208ENST00000467246 ATP1A2P50993 1020 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 IRAK1P51617 712 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ZNF132P52740 706 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ZNF844Q08AG5 666 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 PTP4A2Q12974 167 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 MAMLD1Q13495 774 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 CYP1B1Q16678 543 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 MPZL3Q6UWV2 235 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 ZDHHC24Q6UX98 284 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 TSHZ1Q6ZSZ6 1077 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 EFCAB13Q8IY85 973 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 FBXO25Q8TCJ0 367 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 SLC10A4Q96EP9 437 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 TRIM11Q96F44 468 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 PPP1R16BQ96T49 567 aa12.18□□□□□ -0.46
HPS1-208ENST00000467246 CAPS2Q9BXY5 557 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms