RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SLC2A13Q96QE2 648 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 PNKPQ96T60 521 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 AIFM2Q9BRQ8 373 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 C11orf54Q9H0W9 315 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 GSTO2Q9H4Y5 243 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 CASS4Q9NQ75 786 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 CTTNBP2NLQ9P2B4 639 aa4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 MYBBP1AQ9BQG0 1328 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-209ENST00000466862 LRRC3CA6NJW4 275 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 CGB1A6NKQ9 187 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 FZD9O00144 591 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 SBK3P0C264 359 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 FLYWCH1Q4VC44 716 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 DPF2Q92785 391 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 RAB24Q969Q5 203 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 KLK15Q9H2R5 256 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 RSAD1Q9HA92 442 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 ARPP21Q9UBL0 812 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 ZBTB21Q9ULJ3 1066 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 DNM3Q9UQ16 869 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 WASHC2AQ641Q2 1341 aa4.13□□□□□ -1.75
GTF3C3-209ENST00000466862 COL3A1P02461 1466 aaPredicted RBP4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 PROP1O75360 226 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 SRGNP10124 158 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 CPEP16870 476 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 C5AR1P21730 350 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 IARSP41252 1262 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 CDC42EP1Q00587 391 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 VWA1Q6PCB0 445 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 SRRM1Q8IYB3 904 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 COLGALT2Q8IYK4 626 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 TBC1D15Q8TC07 691 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 PTCD3Q96EY7 689 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 MRGPRX4Q96LA9 322 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 SPATA5L1Q9BVQ7 753 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 LRIT1Q9P2V4 623 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 MTO1Q9Y2Z2 717 aaKnown RBP4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 PRKAB1Q9Y478 270 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 IPPQ9Y573 584 aa4.12□□□□□ -1.75
GTF3C3-209ENST00000466862 TRGV11A0A075B6L2 103 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 PRAMEF33A0A0G2JMD5 474 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 KIAA0391O15091 583 aaKnown RBP4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 GRM6O15303 877 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 SGTAO43765 313 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 PRAMEF10O60809 474 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 ELFN1P0C7U0 828 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 EDNRBP24530 442 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 MAPK10P53779 464 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 SF3B3Q15393 1217 aaKnown RBP4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 FOXR2Q6PJQ5 311 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 NECAB2Q7Z6G3 386 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 CNTD1Q8N815 330 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 C1orf162Q8NEQ5 155 aaPredicted RBP4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 JADE3Q92613 823 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 UROC1Q96N76 676 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 KLHL32Q96NJ5 620 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 DMRTA2Q96SC8 542 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 C7orf25Q9BPX7 421 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 SLC17A6Q9P2U8 582 aa4.11□□□□□ -1.75
GTF3C3-209ENST00000466862 NDUFS2O75306 463 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 KCNA2P16389 499 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 WT1P19544 449 aaPredicted RBP4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 ITPKBP27987 946 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 CNGA1P29973 690 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 FOLR3P41439 243 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 KRT85P78386 507 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 MC2RQ01718 297 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 TLE1Q04724 770 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 PABPC1LQ4VXU2 614 aaKnown RBP4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 PAPD7Q5XG87 772 aaKnown RBP4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 EGFLAMQ63HQ2 1017 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 ZNF365Q70YC5 407 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 PEG10Q86TG7 708 aaKnown RBP4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 ARHGEF25Q86VW2 580 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 RHOT1Q8IXI2 618 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 SH2D3CQ8N5H7 860 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 TMIEQ8NEW7 156 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 NLGN4YQ8NFZ3 816 aaPredicted RBP4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 LPIN2Q92539 896 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 TMEM125Q96AQ2 219 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 SARAFQ96BY9 339 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 TMX3Q96JJ7 454 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 TIMP4Q99727 224 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 KIAA1586Q9HCI6 787 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 JKAMPQ9P055 326 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 INTUQ9ULD6 942 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 CDYLQ9Y232 598 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 ENTPD2Q9Y5L3 495 aa4.1□□□□□ -1.75
GTF3C3-209ENST00000466862 WDR27A2RRH5 827 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 E9PLN8 166 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 MPPED1O15442 326 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 HTRA2O43464 458 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 PCDHGA12O60330 932 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 SLC43A1O75387 559 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 SUN1O94901 812 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 AGFG2O95081 481 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 CD1AP06126 327 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 TXNRD1Q16881 649 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 C3orf36Q3SXR2 165 aa4.09□□□□□ -1.75
GTF3C3-209ENST00000466862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms