RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 KHDC1Q4VXA5 237 aaKnown RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 UTP14CQ5TAP6 766 aaKnown RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 HECTD2Q5U5R9 776 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 ABHD17BQ5VST6 288 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 FOXR2Q6PJQ5 311 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 LCORLQ8N3X6 602 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 BEND2Q8NDZ0 799 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 STAG1Q8WVM7 1258 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 NACC2Q96BF6 587 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 BOD1Q96IK1 185 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 PNKPQ96T60 521 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 VRK1Q99986 396 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 PACSIN1Q9BY11 444 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 TMEM74BQ9NUR3 256 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 DDX56Q9NY93 547 aaKnown RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 JKAMPQ9P055 326 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 RNF181Q9P0P0 153 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 KCNE5Q9UJ90 142 aa5.12□□□□□ -1.59
VPS13D-203ENST00000466732 MTO1Q9Y2Z2 717 aaKnown RBP5.12□□□□□ -1.59
VPS13D-203ENST00000466732 SLC43A1O75387 559 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 AGFG2O95081 481 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 IL33O95760 270 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 ITGAMP11215 1152 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 MALP21145 153 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 PROZP22891 400 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 USP14P54578 494 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 SNAPC2Q13487 334 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 CYP2A13Q16696 494 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 GPR149Q86SP6 731 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 PRR18Q8N4B5 295 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 FUBP1Q96AE4 644 aaKnown RBP5.11□□□□□ -1.59
VPS13D-203ENST00000466732 HOOK2Q96ED9 719 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 HSPBAP1Q96EW2 488 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 TLR10Q9BXR5 811 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 AASDHPPTQ9NRN7 309 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 SYBUQ9NX95 663 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 PACSIN3Q9UKS6 424 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 SLC45A2Q9UMX9 530 aa5.11□□□□□ -1.59
VPS13D-203ENST00000466732 LRRC14BA6NHZ5 514 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 F2RL2O00254 374 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 ERN1O75460 977 aaKnown RBP5.1□□□□□ -1.59
VPS13D-203ENST00000466732 ALDH1L1O75891 902 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 RHOBTB3O94955 611 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 ZFPL1O95159 310 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 POU2F2P09086 479 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 PDGFRBP09619 1106 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 NCLP19338 710 aaKnown RBP5.1□□□□□ -1.59
VPS13D-203ENST00000466732 AVPR1BP47901 424 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 COL10A1Q03692 680 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 CRB2Q5IJ48 1285 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 USP45Q70EL2 814 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 ZNF365Q70YC5 407 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 C3orf20Q8ND61 904 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 SUPT20HQ8NEM7 779 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 GPR150Q8NGU9 434 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 LINC00476Q8WZB0 136 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 MED15Q96RN5 788 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 TOR3AQ9H497 397 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 GALNT9Q9HCQ5 603 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 TCF7L1Q9HCS4 588 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 MAN1C1Q9NR34 630 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 IP6K2Q9UHH9 426 aa5.1□□□□□ -1.59
VPS13D-203ENST00000466732 SHROOM4Q9ULL8 1493 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 NT5C1B-RDH14C9J2C7 533 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 SUV39H1O43463 412 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 DTNBO60941 627 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 HKR1P10072 659 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 TGM1P22735 817 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 FXR1P51114 621 aaKnown RBP eCLIP5.09□□□□□ -1.59
VPS13D-203ENST00000466732 BLOC1S1P78537 153 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 SLC4A10Q6U841 1118 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-203ENST00000466732 CATIPQ7Z7H3 387 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 Q8NA96 180 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 COQ10AQ96MF6 247 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 KLHL32Q96NJ5 620 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 UNKLQ9H9P5 680 aaKnown RBP5.09□□□□□ -1.59
VPS13D-203ENST00000466732 VSX1Q9NZR4 365 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-203ENST00000466732 TESQ9UGI8 421 aaKnown RBP5.09□□□□□ -1.59
VPS13D-203ENST00000466732 CDYLQ9Y232 598 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 POLHQ9Y253 713 aa5.09□□□□□ -1.59
VPS13D-203ENST00000466732 EPN1Q9Y6I3 576 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-203ENST00000466732 MYADML2A6NDP7 307 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 VCAM1P19320 739 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 AKAP5P24588 427 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 SMARCA1P28370 1054 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 VAV2P52735 878 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 SEC24CP53992 1094 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 MCL1Q07820 350 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 FOXI1Q12951 378 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 TTF1Q15361 905 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-203ENST00000466732 GEN1Q17RS7 908 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 CCDC93Q567U6 631 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 THEMIS2Q5TEJ8 643 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 TMIEQ8NEW7 156 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 CAVIN3Q969G5 261 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 RGMAQ96B86 450 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 Q96MF0 132 aa5.08□□□□□ -1.6
VPS13D-203ENST00000466732 GTPBP4Q9BZE4 634 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms