RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 TMEM132DQ14C87 1099 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 POSTNQ15063 836 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 KYAT1Q16773 422 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 KMT5BQ4FZB7 885 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 KIAA0319Q5VV43 1072 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 LMBRD2Q68DH5 695 aaPredicted RBP10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 SYCE2Q6PIF2 218 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 TMC5Q6UXY8 1006 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 PPFIBP1Q86W92 1011 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 BEST2Q8NFU1 509 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 SLC22A17Q8WUG5 538 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 ANP32BQ92688 251 aaKnown RBP10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 KCNN1Q92952 543 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 FAM84AQ96KN4 292 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 CHST7Q9NS84 486 aa10.57□□□□□ -0.72
RTFDC1-205ENST00000466260 A0A1W2PQ27 194 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 A0A1W2PQ64 194 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 A0A1W2PQD8 194 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 C2orf72A6NCS6 295 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 TMEM189-UBE2V1I3L0A0 370 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 TNFRSF10AO00220 468 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 KLRC4O43908 158 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 ZNF202O95125 648 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 EFEMP2O95967 443 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 WNT7BP56706 349 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 SMAD2Q15796 467 aaKnown RBP10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 CES5AQ6NT32 575 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 CD300LGQ6UXG3 332 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 CRELD2Q6UXH1 353 aaPredicted RBP10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 DSTYKQ6XUX3 929 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 KRBA2Q6ZNG9 492 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 EFCAB13Q8IY85 973 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 GPD1LQ8N335 351 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 RDH13Q8NBN7 331 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 RPGRIP1Q96KN7 1286 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 FBXL18Q96ME1 805 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 PLEKHA5Q9HAU0 1116 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 CD320Q9NPF0 282 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 DZANK1Q9NVP4 752 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 RBAKQ9NYW8 714 aaPredicted RBP10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 TIMM13Q9Y5L4 95 aaPredicted RBP10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 CDY1Q9Y6F8 540 aa10.56□□□□□ -0.72
RTFDC1-205ENST00000466260 EIF3DO15371 548 aaKnown RBP eCLIP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 ADAM12O43184 909 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 TGM5O43548 720 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 TRAPPC3O43617 180 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 RFPL2O75678 378 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 LDHAP00338 332 aaKnown RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 RPN1P04843 607 aaKnown RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 GARTP22102 1010 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 FGFR3P22607 806 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 RPL9P32969 192 aaKnown RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 HOXD13P35453 343 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 TFAMQ00059 246 aaKnown RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 CBX2Q14781 532 aaPredicted RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 TMEM184AQ6ZMB5 413 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 EPM2AIP1Q7L775 607 aaPredicted RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 BRSK2Q8IWQ3 736 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 CD302Q8IX05 232 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 GJD3Q8N144 294 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 KIAA0895Q8NCT3 520 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 LNX1Q8TBB1 728 aaPredicted RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 ZNF507Q8TCN5 953 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 SCFD1Q8WVM8 642 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 S1PR5Q9H228 398 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 POMKQ9H5K3 350 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 SFXN1Q9H9B4 322 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 RXFP1Q9HBX9 757 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 HSPBP1Q9NZL4 362 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 USP25Q9UHP3 1055 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 STYXL1Q9Y6J8 313 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 UBE4BO95155 1302 aa10.55□□□□□ -0.72
RTFDC1-205ENST00000466260 C5orf42Q9H799 3197 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 PVALEFA0A1B0GWK0 134 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 EXTL3O43909 919 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 CLSTN1O94985 981 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 ITGB3P05106 788 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 KRT19P08727 400 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 TMEM191BP0C7N4 346 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 HOXB8P17481 243 aaPredicted RBP10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 LRPAP1P30533 357 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 OR1D2P34982 312 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 CDR1P51861 262 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 CREMQ03060 361 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 ZP2Q05996 745 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 EHHADHQ08426 723 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 STK4Q13043 487 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 PNOCQ13519 176 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 ZBTB6Q15916 424 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 CTXN3Q4LDR2 81 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 SPATA1Q5VX52 437 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms