RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PODXLO00592 558 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 STAU1O95793 577 aaKnown RBP12.01□□□□□ -0.49
VCP-204ENST00000466100 ASS1P00966 412 aaKnown RBP12.01□□□□□ -0.49
VCP-204ENST00000466100 TPM2P07951 284 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 RPL9P32969 192 aaKnown RBP12.01□□□□□ -0.49
VCP-204ENST00000466100 PIK3CAP42336 1068 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 AARSP49588 968 aaKnown RBP eCLIP12.01□□□□□ -0.49
VCP-204ENST00000466100 CLCNKBP51801 687 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 MYL6P60660 151 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
VCP-204ENST00000466100 GSE1Q14687 1217 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 LRRC52Q8N7C0 313 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 UROC1Q96N76 676 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 YME1L1Q96TA2 773 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 RAD9AQ99638 391 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 TMEM175Q9BSA9 504 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 CRACR2AQ9BSW2 395 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 INTS2Q9H0H0 1204 aaKnown RBP12.01□□□□□ -0.49
VCP-204ENST00000466100 SIX2Q9NPC8 291 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 MARCH5Q9NX47 278 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 RAB20Q9NX57 234 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 GCNT4Q9P109 453 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 AGAP1Q9UPQ3 857 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 INSL6Q9Y581 213 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 MRPL42Q9Y6G3 142 aaKnown RBP12.01□□□□□ -0.49
VCP-204ENST00000466100 SZT2Q5T011 3432 aa12.01□□□□□ -0.49
VCP-204ENST00000466100 GRXCR1A8MXD5 290 aa12□□□□□ -0.49
VCP-204ENST00000466100 F8W810 466 aa12□□□□□ -0.49
VCP-204ENST00000466100 TMEM189-UBE2V1I3L0A0 370 aa12□□□□□ -0.49
VCP-204ENST00000466100 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
VCP-204ENST00000466100 SPTLC1O15269 473 aa12□□□□□ -0.49
VCP-204ENST00000466100 EFEMP2O95967 443 aa12□□□□□ -0.49
VCP-204ENST00000466100 SLC9A1P19634 815 aa12□□□□□ -0.49
VCP-204ENST00000466100 PON1P27169 355 aa12□□□□□ -0.49
VCP-204ENST00000466100 SLC11A1P49279 550 aa12□□□□□ -0.49
VCP-204ENST00000466100 KLK7P49862 253 aa12□□□□□ -0.49
VCP-204ENST00000466100 ZNF75DP51815 510 aa12□□□□□ -0.49
VCP-204ENST00000466100 RBP5P82980 135 aa12□□□□□ -0.49
VCP-204ENST00000466100 UBXN1Q04323 297 aa12□□□□□ -0.49
VCP-204ENST00000466100 RNASELQ05823 741 aaKnown RBP12□□□□□ -0.49
VCP-204ENST00000466100 BTG3Q14201 252 aaPredicted RBP12□□□□□ -0.49
VCP-204ENST00000466100 SYCP1Q15431 976 aa12□□□□□ -0.49
VCP-204ENST00000466100 PTPN21Q16825 1174 aa12□□□□□ -0.49
VCP-204ENST00000466100 EXOC3L4Q17RC7 722 aa12□□□□□ -0.49
VCP-204ENST00000466100 FILIP1LQ4L180 1135 aa12□□□□□ -0.49
VCP-204ENST00000466100 TRIM65Q6PJ69 517 aa12□□□□□ -0.49
VCP-204ENST00000466100 GBP6Q6ZN66 633 aa12□□□□□ -0.49
VCP-204ENST00000466100 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
VCP-204ENST00000466100 CLP1Q92989 425 aaKnown RBP12□□□□□ -0.49
VCP-204ENST00000466100 DDX27Q96GQ7 796 aaKnown RBP12□□□□□ -0.49
VCP-204ENST00000466100 PI4K2AQ9BTU6 479 aa12□□□□□ -0.49
VCP-204ENST00000466100 APOBEC3GQ9HC16 384 aaKnown RBP12□□□□□ -0.49
VCP-204ENST00000466100 TULP1O00294 542 aaPredicted RBP11.99□□□□□ -0.49
VCP-204ENST00000466100 NRP1O14786 923 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 CBFA2T2O43439 604 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 TLL1O43897 1013 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 ZC3H11AO75152 810 aaKnown RBP eCLIP11.99□□□□□ -0.49
VCP-204ENST00000466100 PHACTR2O75167 634 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 NOL4O94818 638 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 ARHGEF15O94989 841 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 KIF4AO95239 1232 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 ITGB1P05556 798 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 GALTP07902 379 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 KRT19P08727 400 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 ATICP31939 592 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 PBX3P40426 434 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 MRE11P49959 708 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 RABGGTBP53611 331 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 BCAR1P56945 870 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 LILRA4P59901 499 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 NOP14P78316 857 aaKnown RBP11.99□□□□□ -0.49
VCP-204ENST00000466100 APBA1Q02410 837 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 CETN1Q12798 172 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 FKBP15Q5T1M5 1219 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 SPOPLQ6IQ16 392 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 LIMS2Q7Z4I7 341 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 TMEM173Q86WV6 379 aaPredicted RBP11.99□□□□□ -0.49
VCP-204ENST00000466100 TDHQ8IZJ6 230 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 BCL7CQ8WUZ0 217 aaPredicted RBP11.99□□□□□ -0.49
VCP-204ENST00000466100 RABGGTAQ92696 567 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 TAF4BQ92750 862 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 ELMO3Q96BJ8 720 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 MRFAP1L1Q96HT8 127 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 HPDLQ96IR7 371 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 ZNF560Q96MR9 790 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 GANQ9H2C0 597 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 PLCB1Q9NQ66 1216 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
VCP-204ENST00000466100 NUB1Q9Y5A7 615 aa11.99□□□□□ -0.49
VCP-204ENST00000466100 COL4A4P53420 1690 aaPredicted RBP11.99□□□□□ -0.49
VCP-204ENST00000466100 ITIH6Q6UXX5 1313 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 EPHB6O15197 1021 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 MYOGP15173 224 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 LAG3P18627 525 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 PNPLA4P41247 253 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 OR1G1P47890 313 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 TAF6P49848 677 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 TRPC3Q13507 836 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 SGSM1Q2NKQ1 1148 aa11.98□□□□□ -0.49
VCP-204ENST00000466100 ZNF699Q32M78 642 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms