RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 APBA1Q02410 837 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 SP140Q13342 867 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 MRPL49Q13405 166 aaKnown RBP5.55□□□□□ -1.52
LRCH3-211ENST00000466054 MINDY4Q4G0A6 757 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 METTL24Q5JXM2 366 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 ATAT1Q5SQI0 421 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 PLXDC1Q8IUK5 500 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 TRMT2AQ8IZ69 625 aaKnown RBP5.55□□□□□ -1.52
LRCH3-211ENST00000466054 ZNF384Q8TF68 577 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 CASKIN2Q8WXE0 1202 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 DPF2Q92785 391 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 PDCD2LQ9BRP1 358 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.55□□□□□ -1.52
LRCH3-211ENST00000466054 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
LRCH3-211ENST00000466054 UNC119BA6NIH7 251 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 TEX33O43247 280 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 MARCH6O60337 910 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 IL2RBP14784 551 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 LPOP22079 712 aaPredicted RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 GUCY1A2P33402 732 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 SLC6A9P48067 706 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 FLT3LGP49771 235 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 CDC42EP1Q00587 391 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 FOXI1Q12951 378 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 MPP3Q13368 585 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 MLC1Q15049 377 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 C3orf36Q3SXR2 165 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 PRAMEF14Q5SWL7 426 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 IFIT1BQ5T764 474 aaKnown RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 THEMIS2Q5TEJ8 643 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 ZNF572Q7Z3I7 529 aaPredicted RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 TTC7BQ86TV6 843 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 TPH2Q8IWU9 490 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 RHOT1Q8IXI2 618 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 SRRM1Q8IYB3 904 aaKnown RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 CPEB3Q8NE35 698 aaKnown RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 TSR2Q969E8 191 aaKnown RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 HPS3Q969F9 1004 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 MAP3K14Q99558 947 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 PCGF6Q9BYE7 350 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 GTPBP4Q9BZE4 634 aaKnown RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 SENP6Q9GZR1 1112 aaPredicted RBP5.54□□□□□ -1.52
LRCH3-211ENST00000466054 SLC12A5Q9H2X9 1139 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 TDP1Q9NUW8 608 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 TMEM140Q9NV12 185 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 MOCS1Q9NZB8 636 aa5.54□□□□□ -1.52
LRCH3-211ENST00000466054 ERC2O15083 957 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 SLC16A6O15403 523 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 IGLV2-14P01704 120 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 PTPN7P35236 360 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 ZNF81P51508 661 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 HSP90AB2PQ58FF8 381 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 FAM47AQ5JRC9 791 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 ABHD17BQ5VST6 288 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 EPM2AIP1Q7L775 607 aaPredicted RBP5.53□□□□□ -1.52
LRCH3-211ENST00000466054 OR52N2Q8NGI0 321 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 MVB12AQ96EY5 273 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 C8orf48Q96LL4 319 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 CPEB1Q9BZB8 566 aaKnown RBP5.53□□□□□ -1.52
LRCH3-211ENST00000466054 GEMIN8Q9NWZ8 242 aaKnown RBP5.53□□□□□ -1.52
LRCH3-211ENST00000466054 RNF181Q9P0P0 153 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 NOB1Q9ULX3 412 aaKnown RBP5.53□□□□□ -1.52
LRCH3-211ENST00000466054 PCDHA13Q9Y5I0 950 aa5.53□□□□□ -1.52
LRCH3-211ENST00000466054 PIPSLA2A3N6 862 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 PRR5-ARHGAP8B1AHC4 643 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 ADCY6O43306 1168 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 GPR32O75388 356 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 ESRRBO95718 433 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 SPATA31D3P0C874 917 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 HOXB6P17509 224 aaKnown RBP5.52□□□□□ -1.53
LRCH3-211ENST00000466054 DDX6P26196 483 aaKnown RBP eCLIP5.52□□□□□ -1.53
LRCH3-211ENST00000466054 BMPR1AP36894 532 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 FOXF2Q12947 444 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 IL10RAQ13651 578 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 RAB39AQ14964 217 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 PGS1Q32NB8 556 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 GFOD2Q3B7J2 385 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 BEAN1Q3B7T3 259 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 CCDC181Q5TID7 509 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 B3GNT9Q6UX72 402 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 SPATA31D4Q6ZUB0 917 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 DOK3Q7L591 496 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 CATIPQ7Z7H3 387 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 DRC7Q8IY82 874 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 SLC44A3Q8N4M1 653 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 FAM98AQ8NCA5 519 aaKnown RBP5.52□□□□□ -1.53
LRCH3-211ENST00000466054 SLC35G2Q8TBE7 412 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 MDM1Q8TC05 714 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 CCHCR1Q8TD31 782 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 NSUN6Q8TEA1 469 aaKnown RBP5.52□□□□□ -1.53
LRCH3-211ENST00000466054 C1GALT1C1Q96EU7 318 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 CALCOCO1Q9P1Z2 691 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 CLCA2Q9UQC9 943 aa5.52□□□□□ -1.53
LRCH3-211ENST00000466054 B5MCH6 92 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 PJA2O43164 708 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 PRPF3O43395 683 aaKnown RBP5.51□□□□□ -1.53
LRCH3-211ENST00000466054 AP1G1O43747 822 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 ZFPL1O95159 310 aa5.51□□□□□ -1.53
LRCH3-211ENST00000466054 ARIH2O95376 493 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms