RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 DPH6Q7L8W6 267 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 KREMEN2Q8NCW0 462 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 TAF4BQ92750 862 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
NPHP3-203ENST00000465756 RHOBTB2Q9BYZ6 727 aa11.63□□□□□ -0.55
NPHP3-203ENST00000465756 MAGEC2Q9UBF1 373 aaPredicted RBP11.63□□□□□ -0.55
NPHP3-203ENST00000465756 ALDH1A3P47895 512 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 TUFMP49411 452 aaKnown RBP11.62□□□□□ -0.55
NPHP3-203ENST00000465756 CEP135Q66GS9 1140 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 OVOS1Q6IE37 1185 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 VN1R2Q8NFZ6 395 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 FAM200AQ8TCP9 573 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 DHTKD1Q96HY7 919 aaPredicted RBP11.62□□□□□ -0.55
NPHP3-203ENST00000465756 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 PPP1R37O75864 691 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 ERVFC1P60507 584 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 LRRC63Q05C16 580 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 ARHGAP15Q53QZ3 475 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 WDR44Q5JSH3 913 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 RARS2Q5T160 578 aaKnown RBP11.62□□□□□ -0.55
NPHP3-203ENST00000465756 ADAMTS19Q8TE59 1207 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 NXPE3Q969Y0 559 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 CGRRF1Q99675 332 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 PHF7Q9BWX1 381 aaPredicted RBP11.62□□□□□ -0.55
NPHP3-203ENST00000465756 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 MTRRQ9UBK8 725 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 NLRC5Q86WI3 1866 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 ARHGEF15O94989 841 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 HOXA9P31269 272 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 EPHB3P54753 998 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 ARPP19P56211 112 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 RPL10AP62906 217 aaKnown RBP11.62□□□□□ -0.55
NPHP3-203ENST00000465756 CUL4BQ13620 913 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 PKP1Q13835 747 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 EDRF1Q3B7T1 1238 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 CCDC40Q4G0X9 1142 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 C4orf50Q6ZRC1 276 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 C15orf39Q6ZRI6 1047 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 TMC2Q8TDI7 906 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 C1QTNF1Q9BXJ1 281 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 AGAP1Q9UPQ3 857 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 ASB3Q9Y575 518 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 GBF1Q92538 1859 aa11.62□□□□□ -0.55
NPHP3-203ENST00000465756 PTGESO14684 152 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 RAB33AQ14088 237 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ENOX2Q16206 610 aaKnown RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ZNF658Q5TYW1 1059 aaPredicted RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 TAS1R3Q7RTX0 852 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 SLC9A9Q8IVB4 645 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ANP32BQ92688 251 aaKnown RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ZNF512Q96ME7 567 aaPredicted RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 PCIF1Q9H4Z3 704 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 POU2F2P09086 479 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 PBX3P40426 434 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 PSMD6Q15008 389 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 SNRNP35Q16560 246 aaKnown RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 JADE1Q6IE81 842 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 FAM81BQ96LP2 452 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ADAM7Q9H2U9 754 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 AFF4Q9UHB7 1163 aaKnown RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 NR3C1P04150 777 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 FGFR3P22607 806 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ANXA13P27216 316 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 UPP1Q16831 310 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ZNF667Q5HYK9 610 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 ADHFE1Q8IWW8 467 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 CEP120Q8N960 986 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 SAAL1Q96ER3 474 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 GPR88Q9GZN0 384 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 MAN1C1Q9NR34 630 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 INTS13Q9NVM9 706 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 MARCH5Q9NX47 278 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 FNDC1Q4ZHG4 1894 aaPredicted RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 GRXCR2A6NFK2 248 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 DLATP10515 647 aaKnown RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 PDE6CP51160 858 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 CLCNKBP51801 687 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 DNTTIP2Q5QJE6 756 aaKnown RBP11.61□□□□□ -0.55
NPHP3-203ENST00000465756 SENP8Q96LD8 212 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 NUP62CLQ9H1M0 184 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 MIOSQ9NXC5 875 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 HCFC2Q9Y5Z7 792 aa11.61□□□□□ -0.55
NPHP3-203ENST00000465756 MYH15Q9Y2K3 1946 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 H3BQ06 376 aaPredicted RBP11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CYB561D2O14569 222 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 MBTPS2O43462 519 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 SLC8A3P57103 927 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 NFIL3Q16649 462 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 FAM186BQ8IYM0 893 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 SPPL2BQ8TCT7 592 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 GDPD2Q9HCC8 539 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 CHST7Q9NS84 486 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 USTQ9Y2C2 406 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 GOLGA8IPA6NC78 632 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 GOLGA8JA6NMD2 632 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 MEIS3P2A8K0S8 358 aa11.6□□□□□ -0.55
NPHP3-203ENST00000465756 ANKRD63C9JTQ0 380 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms