RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.42□□□□□ -0.19e-6■■■■■ 27.7
ATF3-208ENST00000465155 GANQ9H2C0 597 aa14.42□□□□□ -0.1
ATF3-208ENST00000465155 APEX2Q9UBZ4 518 aa14.42□□□□□ -0.1
ATF3-208ENST00000465155 SCN1AP35498 2009 aa14.42□□□□□ -0.1
ATF3-208ENST00000465155 ZC3H11AO75152 810 aaKnown RBP eCLIP14.41□□□□□ -0.1
ATF3-208ENST00000465155 UCHL3P15374 230 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 POLR2FP61218 127 aaKnown RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 NOP14P78316 857 aaKnown RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 RNASELQ05823 741 aaKnown RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 TBX2Q13207 712 aaPredicted RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 ZNF699Q32M78 642 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 FIGNQ5HY92 759 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 C9orf57Q5W0N0 161 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 PHLDB3Q6NSJ2 640 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 GJB7Q6PEY0 223 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 TMCO2Q7Z6W1 182 aaPredicted RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 ARHGEF19Q8IW93 802 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 TATDN2Q93075 761 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 TOP1MTQ969P6 601 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 CASD1Q96PB1 797 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 TTYH3Q9C0H2 523 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 XYLT2Q9H1B5 865 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 NLRC4Q9NPP4 1024 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 TBC1D13Q9NVG8 400 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 KANSL3Q9P2N6 904 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 IMPACTQ9P2X3 320 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 CACNG4Q9UBN1 327 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 NR2E3Q9Y5X4 410 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 ANO9A1A5B4 782 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 CASTOR2A6NHX0 329 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 GOLGA6L6A8MZA4 724 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 PPEF2O14830 753 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 ASS1P00966 412 aaKnown RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 TPM1P09493 284 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 LRPAP1P30533 357 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 ATICP31939 592 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 CASP14P31944 242 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 FAM117BQ6P1L5 589 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 RRAGAQ7L523 313 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 CACNA2D4Q7Z3S7 1137 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 PPM1KQ8N3J5 372 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 IQCDQ96DY2 449 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 HPDLQ96IR7 371 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 APOBEC3GQ9HC16 384 aaKnown RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 UBE2TQ9NPD8 197 aaPredicted RBP14.41□□□□□ -0.1
ATF3-208ENST00000465155 CEP72Q9P209 647 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 DNAJC12Q9UKB3 198 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 FHOD1Q9Y613 1164 aa14.41□□□□□ -0.1
ATF3-208ENST00000465155 TBKBP1A7MCY6 615 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 RNF225M0QZC1 329 aaPredicted RBP14.4□□□□□ -0.1
ATF3-208ENST00000465155 PIRO00625 290 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 DGKIO75912 1065 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 DDHD2O94830 711 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 FXR1P51114 621 aaKnown RBP eCLIP14.4□□□□□ -0.1
ATF3-208ENST00000465155 CLCNKBP51801 687 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 MYO1EQ12965 1108 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 TUSC3Q13454 348 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 RAPGEF1Q13905 1077 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 PAN2Q504Q3 1202 aaKnown RBP14.4□□□□□ -0.1
ATF3-208ENST00000465155 IQCEQ6IPM2 695 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 ZNF280BQ86YH2 543 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 LRRC52Q8N7C0 313 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 FAM193BQ96PV7 902 aaPredicted RBP14.4□□□□□ -0.1
ATF3-208ENST00000465155 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 AJAP1Q9UKB5 411 aaPredicted RBP14.4□□□□□ -0.1
ATF3-208ENST00000465155 CAPN11Q9UMQ6 739 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 NUB1Q9Y5A7 615 aa14.4□□□□□ -0.1
ATF3-208ENST00000465155 A0A1W2PQJ5 194 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 PODXLO00592 558 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 ADKP55263 362 aaKnown RBP14.39□□□□□ -0.11
ATF3-208ENST00000465155 WDR72Q3MJ13 1102 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 ZNF667Q5HYK9 610 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 RSPH1Q8WYR4 309 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 HERVK_113Q902F9 699 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 RABGGTAQ92696 567 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 TAF4BQ92750 862 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 ZNF560Q96MR9 790 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 PAAF1Q9BRP4 392 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 NAA15Q9BXJ9 866 aaKnown RBP14.39□□□□□ -0.11
ATF3-208ENST00000465155 MRPL9Q9BYD2 267 aaKnown RBP14.39□□□□□ -0.11
ATF3-208ENST00000465155 CXXC1Q9P0U4 656 aaPredicted RBP14.39□□□□□ -0.11
ATF3-208ENST00000465155 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
ATF3-208ENST00000465155 FBXL5Q9UKA1 691 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 LUC7L2Q9Y383 392 aaKnown RBP14.39□□□□□ -0.11
ATF3-208ENST00000465155 COL4A6Q14031 1691 aa14.39□□□□□ -0.11
ATF3-208ENST00000465155 AKR1B15C9JRZ8 316 aaPredicted RBP14.38□□□□□ -0.11
ATF3-208ENST00000465155 B4GALT3O60512 393 aa14.38□□□□□ -0.11
ATF3-208ENST00000465155 PTMAP06454 111 aaKnown RBP14.38□□□□□ -0.11
ATF3-208ENST00000465155 RFX1P22670 979 aa14.38□□□□□ -0.11
ATF3-208ENST00000465155 RPL9P32969 192 aaKnown RBP14.38□□□□□ -0.11
ATF3-208ENST00000465155 KRT9P35527 623 aa14.38□□□□□ -0.11
ATF3-208ENST00000465155 PNPLA4P41247 253 aa14.38□□□□□ -0.11
ATF3-208ENST00000465155 MFAP3P55082 362 aa14.38□□□□□ -0.11
ATF3-208ENST00000465155 ZBED6P86452 979 aa14.38□□□□□ -0.11
ATF3-208ENST00000465155 DSC1Q08554 894 aa14.38□□□□□ -0.11
ATF3-208ENST00000465155 UPP1Q16831 310 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms