RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 MFSD14AQ96MC6 490 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 COLEC11Q9BWP8 271 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 SRRTQ9BXP5 876 aaKnown RBP12.84□□□□□ -0.35
APTX-213ENST00000465003 IGFLR1Q9H665 355 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 INTS13Q9NVM9 706 aa12.84□□□□□ -0.35
APTX-213ENST00000465003 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.35
APTX-213ENST00000465003 CETN3O15182 167 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 RPL13P26373 211 aaKnown RBP12.83□□□□□ -0.35
APTX-213ENST00000465003 PSMC2P35998 433 aaKnown RBP12.83□□□□□ -0.35
APTX-213ENST00000465003 GCLMP48507 274 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 FKBP3Q00688 224 aaKnown RBP12.83□□□□□ -0.35
APTX-213ENST00000465003 LRRC63Q05C16 580 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.35
APTX-213ENST00000465003 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 MRPL38Q96DV4 380 aaKnown RBP12.83□□□□□ -0.35
APTX-213ENST00000465003 CGRRF1Q99675 332 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 ZBP1Q9H171 429 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.35
APTX-213ENST00000465003 SF3B1O75533 1304 aaKnown RBP eCLIP12.83□□□□□ -0.36
APTX-213ENST00000465003 CST3P01034 146 aaPredicted RBP12.83□□□□□ -0.36
APTX-213ENST00000465003 LRPAP1P30533 357 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 VAMP7P51809 220 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 TYRO3Q06418 890 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 BFSP1Q12934 665 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 BIRC3Q13489 604 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 TCEAL5Q5H9L2 206 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 DDX53Q86TM3 631 aaKnown RBP12.83□□□□□ -0.36
APTX-213ENST00000465003 WDR49Q8IV35 697 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 CD302Q8IX05 232 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 MLKLQ8NB16 471 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
APTX-213ENST00000465003 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
APTX-213ENST00000465003 SOD2P04179 222 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
APTX-213ENST00000465003 LILRA4P59901 499 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 NFIL3Q16649 462 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 KIAA1841Q6NSI8 718 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 TRAPPC11Q7Z392 1133 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 FEZF2Q8TBJ5 459 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
APTX-213ENST00000465003 RSPH1Q8WYR4 309 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 RWDD2AQ9UIY3 292 aa12.82□□□□□ -0.36
APTX-213ENST00000465003 ANO9A1A5B4 782 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 BICDL2A1A5D9 508 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 PIRO00625 290 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 XPOTO43592 962 aaKnown RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 HCRTO43612 131 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 CXCL14O95715 111 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 EFEMP2O95967 443 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 TNNC2P02585 160 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 NRIP1P48552 1158 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 PTPN14Q15678 1187 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 LLGL2Q6P1M3 1020 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 BORCS6Q96GS4 357 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 UROC1Q96N76 676 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 PI4K2AQ9BTU6 479 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 DERAQ9Y315 318 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 MUC3AQ02505 3323 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 C2orf71A6NGG8 1288 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 LINC01565O15544 149 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 ADAM12O43184 909 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 URODP06132 367 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 KRT13P13646 458 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 CYP3A5P20815 502 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 RPL9P32969 192 aaKnown RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 MYL6P60660 151 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 STX1AQ16623 288 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 PTPROQ16827 1216 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 ANO6Q4KMQ2 910 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 CBWD6Q4V339 395 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 CBWD3Q5JTY5 395 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 CBWD5Q5RIA9 395 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 DSTYKQ6XUX3 929 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
APTX-213ENST00000465003 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 SYAP1Q96A49 352 aaPredicted RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
APTX-213ENST00000465003 TSC2P49815 1807 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 FSCN2O14926 492 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 PHACTR2O75167 634 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 VNN1O95497 513 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 SPATA31D3P0C874 917 aa12.8□□□□□ -0.36
APTX-213ENST00000465003 CTSAP10619 480 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms