RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MYL6P60660 151 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 TFAMQ00059 246 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 NNTQ13423 1086 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 CDR2LQ86X02 465 aaPredicted RBP23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 TRIM11Q96F44 468 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 CARD9Q9H257 536 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 TRIP11Q15643 1979 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 ADCY6O43306 1168 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 ATMINO43313 823 aaPredicted RBP23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 RNF40O75150 1001 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 GNA15P30679 374 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 EPHB4P54760 987 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 OSTNP61366 133 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 KYAT1Q16773 422 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 MARCH8Q5T0T0 291 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 EFCAB13Q8IY85 973 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 CEP120Q8N960 986 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 KRT12Q99456 494 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 CNOT8Q9UFF9 292 aaKnown RBP23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 RALGAPA2Q2PPJ7 1873 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 CCDC188H7C350 402 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 GPR25O00155 361 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 SYF2O95926 243 aaKnown RBP23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 MYBL1P10243 752 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 CAPN2P17655 700 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 SLC7A5Q01650 507 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 PPP1R2P3Q6NXS1 205 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 ZNF410Q86VK4 478 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 MCOLN2Q8IZK6 566 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 UBL4BQ8N7F7 174 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 NLRP7Q8WX94 980 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 PPP1R16BQ96T49 567 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 NIF3L1Q9GZT8 377 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 PDZD7Q9H5P4 517 aa23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 AVENQ9NQS1 362 aaPredicted RBP23.22■■□□□ 1.31
PDLIM2-216ENST00000464275 A6NJR5 290 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 DYNC1LI2O43237 492 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 GYS2P54840 703 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 CENPCQ03188 943 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 MESDQ14696 234 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 CLUL1Q15846 466 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 TSPYL1Q9H0U9 437 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 GNEQ9Y223 722 aaKnown RBP23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 TRIP12Q14669 1992 aaPredicted RBP23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 TMEM110-MUSTN1A8MSY1 372 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 STAG3L1P0CL83 205 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 CXCL8P10145 99 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 ZNF132P52740 706 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 PRAMEF19Q5SWL8 479 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 SCARA3Q6AZY7 606 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 RGMBQ6NW40 437 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 WNT8AQ9H1J5 351 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 FAM204AQ9H8W3 233 aa23.21■■□□□ 1.31
PDLIM2-216ENST00000464275 ARF4P18085 180 aaPredicted RBP23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 NSFP46459 744 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 C17orf99Q6UX52 265 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 KIAA0319LQ8IZA0 1049 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 USP6NLQ92738 828 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 CAVIN3Q969G5 261 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 CSDE1O75534 798 aaKnown RBP23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 COMTP21964 271 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 ZNF699Q32M78 642 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 DCAF12L1Q5VU92 463 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 IFT20Q8IY31 132 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 TMEM192Q8IY95 271 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 CYFIP2Q96F07 1278 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 CPB2Q96IY4 423 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 SCLT1Q96NL6 688 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 NAP1L3Q99457 506 aaPredicted RBP23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 FLRT1Q9NZU1 646 aa23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 CHORDC1Q9UHD1 332 aaPredicted RBP23.2■■□□□ 1.3
PDLIM2-216ENST00000464275 GOLGA6BA6NDN3 693 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 KRIT1O00522 736 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 THAP12O43422 761 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 ZNF865P0CJ78 1059 aaPredicted RBP23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 MYBL2P10244 700 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 INHBEP58166 350 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 MRPS25P82663 173 aaKnown RBP23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 NAA35Q5VZE5 725 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 ALS2CLQ60I27 953 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 IFNL1Q8IU54 200 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 KLHL7Q8IXQ5 586 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 CPA5Q8WXQ8 436 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 ZSWIM1Q9BR11 485 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 GDF3Q9NR23 364 aa23.19■■□□□ 1.3
PDLIM2-216ENST00000464275 LACTBL1A8MY62 500 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 ECM2O94769 699 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 ERLIN2O94905 339 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 HEXIM1O94992 359 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 YWHAEP62258 255 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 NOMO3P69849 1222 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 CDC42EP1Q00587 391 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 OLFML2BQ68BL8 750 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 VCPIP1Q96JH7 1222 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 RNPC3Q96LT9 517 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 XYLT2Q9H1B5 865 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 ASB7Q9H672 318 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 SETD4Q9NVD3 440 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 TSPAN1O60635 241 aa23.18■■□□□ 1.3
PDLIM2-216ENST00000464275 F2P00734 622 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms