RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.48■□□□□ 0.87
LMNB1-204ENST00000463908 TTC28Q96AY4 2481 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 LRRIQ3A6PVS8 624 aaPredicted RBP20.47■□□□□ 0.87
LMNB1-204ENST00000463908 HIDE1A8MVS5 230 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 SPTLC1O15269 473 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 CXCL14O95715 111 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 CTSAP10619 480 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 TNNI1P19237 187 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 DUOXA2Q1HG44 320 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 TIGD5Q53EQ6 642 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 TMC7Q7Z402 723 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 FAM186BQ8IYM0 893 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 MRPL43Q8N983 215 aaKnown RBP20.47■□□□□ 0.87
LMNB1-204ENST00000463908 TMC2Q8TDI7 906 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 FNBP1Q96RU3 617 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 MKNK1Q9BUB5 465 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 HERC2P3Q9BVR0 1158 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 MTMR12Q9C0I1 747 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 RWDD2AQ9UIY3 292 aa20.47■□□□□ 0.87
LMNB1-204ENST00000463908 MYO9BQ13459 2157 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 CST3P01034 146 aaPredicted RBP20.46■□□□□ 0.87
LMNB1-204ENST00000463908 PTMSP20962 102 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 AARSP49588 968 aaKnown RBP eCLIP20.46■□□□□ 0.876e-7■■■■□ 19.6
LMNB1-204ENST00000463908 LILRA4P59901 499 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 FAM171A1Q5VUB5 890 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 TRAPPC11Q7Z392 1133 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 FILIP1Q7Z7B0 1213 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 ADGRD2Q7Z7M1 963 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 CSGALNACT2Q8N6G5 542 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 NGRNQ9NPE2 291 aaKnown RBP20.46■□□□□ 0.87
LMNB1-204ENST00000463908 AGAP1Q9UPQ3 857 aa20.46■□□□□ 0.87
LMNB1-204ENST00000463908 BICDL2A1A5D9 508 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 C2orf71A6NGG8 1288 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 C4BPAP04003 597 aaKnown RBP20.45■□□□□ 0.86
LMNB1-204ENST00000463908 ITGB3P05106 788 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 FGFR3P22607 806 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 POLR2BP30876 1174 aaKnown RBP20.45■□□□□ 0.86
LMNB1-204ENST00000463908 VAMP7P51809 220 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 DSG1Q02413 1049 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 NFKBIBQ15653 356 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 CCDC85BQ15834 202 aaPredicted RBP20.45■□□□□ 0.86
LMNB1-204ENST00000463908 USP41Q3LFD5 358 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 RTP2Q5QGT7 225 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 PLPP4Q5VZY2 271 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 PDE12Q6L8Q7 609 aaKnown RBP20.45■□□□□ 0.86
LMNB1-204ENST00000463908 INTS8Q75QN2 995 aaKnown RBP20.45■□□□□ 0.86
LMNB1-204ENST00000463908 ANKRD36BP1Q96IX9 119 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 SRRTQ9BXP5 876 aaKnown RBP20.45■□□□□ 0.86
LMNB1-204ENST00000463908 NSUN3Q9H649 340 aaKnown RBP20.45■□□□□ 0.86
LMNB1-204ENST00000463908 ENTPD7Q9NQZ7 604 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 STK39Q9UEW8 545 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 NUB1Q9Y5A7 615 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 IRAK3Q9Y616 596 aa20.45■□□□□ 0.86
LMNB1-204ENST00000463908 SF3B1O75533 1304 aaKnown RBP eCLIP20.45■□□□□ 0.864e-6■■■■■ 84.1
LMNB1-204ENST00000463908 TMEM191BP0C7N4 346 aa20.44■□□□□ 0.86
LMNB1-204ENST00000463908 ELAVL2Q12926 359 aaKnown RBP20.44■□□□□ 0.86
LMNB1-204ENST00000463908 SMC1AQ14683 1233 aaKnown RBP20.44■□□□□ 0.86
LMNB1-204ENST00000463908 PTPN14Q15678 1187 aa20.44■□□□□ 0.86
LMNB1-204ENST00000463908 TCEAL5Q5H9L2 206 aa20.44■□□□□ 0.86
LMNB1-204ENST00000463908 SASS6Q6UVJ0 657 aa20.44■□□□□ 0.86
LMNB1-204ENST00000463908 MAFAQ8NHW3 353 aaPredicted RBP20.44■□□□□ 0.86
LMNB1-204ENST00000463908 SUSD3Q96L08 255 aa20.44■□□□□ 0.86
LMNB1-204ENST00000463908 CEP63Q96MT8 703 aa20.44■□□□□ 0.86
LMNB1-204ENST00000463908 ITGA11Q9UKX5 1188 aa20.44■□□□□ 0.86
LMNB1-204ENST00000463908 M0QZQ0 153 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 C2CD2LO14523 706 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 IKBKBO14920 756 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 PER2O15055 1255 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 SLC16A3O15427 465 aaKnown RBP20.43■□□□□ 0.86
LMNB1-204ENST00000463908 TRAPPC3O43617 180 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 TNNC2P02585 160 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 TRIM49P0CI25 452 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 TRIM49CP0CI26 452 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 ERCC5P28715 1186 aaPredicted RBP20.43■□□□□ 0.86
LMNB1-204ENST00000463908 TKTP29401 623 aaKnown RBP20.43■□□□□ 0.86
LMNB1-204ENST00000463908 GTF2F1P35269 517 aaKnown RBP eCLIP20.43■□□□□ 0.86
LMNB1-204ENST00000463908 GLUD2P49448 558 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 RBP5P82980 135 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 ENPEPQ07075 957 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 PPP3CAQ08209 521 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 BFSP1Q12934 665 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 C15orf39Q6ZRI6 1047 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 CEP57Q86XR8 500 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 MICALL1Q8N3F8 863 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 LNX1Q8TBB1 728 aaPredicted RBP20.43■□□□□ 0.86
LMNB1-204ENST00000463908 TTPALQ9BTX7 342 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 RXFP1Q9HBX9 757 aa20.43■□□□□ 0.86
LMNB1-204ENST00000463908 KRT19P08727 400 aa20.42■□□□□ 0.86
LMNB1-204ENST00000463908 EPB41P11171 864 aaKnown RBP20.42■□□□□ 0.86
LMNB1-204ENST00000463908 KRT13P13646 458 aa20.42■□□□□ 0.86
LMNB1-204ENST00000463908 HYAL1Q12794 435 aa20.42■□□□□ 0.86
LMNB1-204ENST00000463908 SKOR2Q2VWA4 1001 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-204ENST00000463908 CT47A1Q5JQC4 288 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-204ENST00000463908 TDRD10Q5VZ19 366 aaKnown RBP20.42■□□□□ 0.86
LMNB1-204ENST00000463908 PRSS55Q6UWB4 352 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-204ENST00000463908 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.42■□□□□ 0.86
LMNB1-204ENST00000463908 RBM23Q86U06 439 aaKnown RBP20.42■□□□□ 0.86
LMNB1-204ENST00000463908 IRF2BP1Q8IU81 584 aa20.42■□□□□ 0.86
LMNB1-204ENST00000463908 GPR65Q8IYL9 337 aa20.42■□□□□ 0.86
LMNB1-204ENST00000463908 PPM1EQ8WY54 764 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms