RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 MTMR9Q96QG7 549 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 CCDC94Q9BW85 323 aaPredicted RBP15.89■□□□□ 0.13
SMC1A-204ENST00000463684 SLITRK6Q9H5Y7 841 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 C8orf33Q9H7E9 229 aaPredicted RBP15.89■□□□□ 0.13
SMC1A-204ENST00000463684 TRPV4Q9HBA0 871 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 ASAH2Q9NR71 780 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 MAFFQ9ULX9 164 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 NUB1Q9Y5A7 615 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 NOTCH4Q99466 2003 aa15.89■□□□□ 0.13
SMC1A-204ENST00000463684 HEPACAM2A8MVW5 462 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 PODXLO00592 558 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 EPB41L2O43491 1005 aaKnown RBP15.88■□□□□ 0.13
SMC1A-204ENST00000463684 EDN1P05305 212 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 TWF1Q12792 350 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 GAS6Q14393 721 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 AASDHQ4L235 1098 aaPredicted RBP15.88■□□□□ 0.13
SMC1A-204ENST00000463684 NT5DC1Q5TFE4 455 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 FAM200AQ8TCP9 573 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 TNFRSF25Q93038 417 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 FBXL5Q9UKA1 691 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 SPTBN2O15020 2390 aa15.88■□□□□ 0.13
SMC1A-204ENST00000463684 K7ERI5 159 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 CHADO15335 359 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 PFKFB2O60825 505 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 DTNBO60941 627 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 MED24O75448 989 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 PAPSS2O95340 614 aaPredicted RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 GJA1P17302 382 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 RPL9P32969 192 aaKnown RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 OSTNP61366 133 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 SOX4Q06945 474 aaPredicted RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 MRPL58Q14197 206 aaKnown RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 DGKKQ5KSL6 1271 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 FAM160A2Q8N612 972 aaPredicted RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 C12orf50Q8NA57 414 aaPredicted RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 ERMNQ8TAM6 284 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 POLR3CQ9BUI4 534 aaPredicted RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 RBM12Q9NTZ6 932 aaKnown RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 CEP72Q9P209 647 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 AFF4Q9UHB7 1163 aaKnown RBP15.87■□□□□ 0.13
SMC1A-204ENST00000463684 TNFSF13BQ9Y275 285 aa15.87■□□□□ 0.13
SMC1A-204ENST00000463684 VWA8A3KMH1 1905 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 K7ESF4 209 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 MOSPD3O75425 235 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 CPB1P15086 417 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 GRM5P41594 1212 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 LIMK1P53667 647 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 EPHA5P54756 1037 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 TEAD2Q15562 447 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 XKR4Q5GH76 650 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 ZNF280DQ6N043 979 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 ALKAL1Q6UXT8 129 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 APPL2Q8NEU8 664 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 KIFAP3Q92845 792 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 KIFC3Q9BVG8 833 aa15.86■□□□□ 0.13
SMC1A-204ENST00000463684 SLC38A8A6NNN8 435 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 BTBD18B2RXH4 712 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 ARNTLO00327 626 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 DPYSL4O14531 572 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 AXIN1O15169 862 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 RPA1P27694 616 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 MARCKSP29966 332 aaPredicted RBP15.85■□□□□ 0.13
SMC1A-204ENST00000463684 N4BP2L1Q5TBK1 243 aaPredicted RBP15.85■□□□□ 0.13
SMC1A-204ENST00000463684 HAUS6Q7Z4H7 955 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 WDR5BQ86VZ2 330 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 RALGPS2Q86X27 583 aaPredicted RBP15.85■□□□□ 0.13
SMC1A-204ENST00000463684 ACAP3Q96P50 834 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 POLD4Q9HCU8 107 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 TPCN1Q9ULQ1 816 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 CFAP47Q6ZTR5 3102 aa15.85■□□□□ 0.13
SMC1A-204ENST00000463684 SPECC1L-ADORA2AF8WAN1 911 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 CTDNEP1O95476 244 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 KCNE1P15382 129 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 PMLP29590 882 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 HOXA6P31267 233 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 MCM4P33991 863 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 MCM7P33993 719 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 SOX9P48436 509 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 TRIM29Q14134 588 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 ZNF568Q3ZCX4 644 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 RNF19BQ6ZMZ0 732 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 Q6ZS52 159 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 DIS3L2Q8IYB7 885 aaKnown RBP15.84■□□□□ 0.13
SMC1A-204ENST00000463684 CEP120Q8N960 986 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 DDX12PQ92771 950 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 SUSD3Q96L08 255 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 ZMAT2Q96NC0 199 aaKnown RBP15.84■□□□□ 0.13
SMC1A-204ENST00000463684 ACO2Q99798 780 aaKnown RBP15.84■□□□□ 0.13
SMC1A-204ENST00000463684 TCHPQ9BT92 498 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 CDT1Q9H211 546 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 ARRDC1-AS1Q9H2J1 176 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 TMEM60Q9H2L4 133 aa15.84■□□□□ 0.13
SMC1A-204ENST00000463684 A0A1W2PRU2 124 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 MYBPHLA2RUH7 354 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 CCDC169A6NNP5 214 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 WNT7AO00755 349 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 ZNF806P0C7X5 589 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 FDPSP14324 419 aaKnown RBP15.83■□□□□ 0.12
SMC1A-204ENST00000463684 MUTP22033 750 aa15.83■□□□□ 0.12
SMC1A-204ENST00000463684 EPHB3P54753 998 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms