RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 RRM1P23921 792 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 ZNF132P52740 706 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 SMC1AQ14683 1233 aaKnown RBP13.71□□□□□ -0.22
VAPB-203ENST00000463370 FAM187BQ17R55 369 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 KIZQ2M2Z5 673 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 CCDC70Q6NSX1 233 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.22
VAPB-203ENST00000463370 SAPCD2Q86UD0 394 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 MCOLN2Q8IZK6 566 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 AENQ8WTP8 325 aaKnown RBP13.71□□□□□ -0.22
VAPB-203ENST00000463370 KAT2BQ92831 832 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 DDX47Q9H0S4 455 aaKnown RBP13.71□□□□□ -0.22
VAPB-203ENST00000463370 ZCCHC17Q9NP64 241 aaKnown RBP13.71□□□□□ -0.22
VAPB-203ENST00000463370 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 SIX4Q9UIU6 781 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 COL1A2P08123 1366 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 LACTBL1A8MY62 500 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 KRIT1O00522 736 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 TSPAN1O60635 241 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 HEXIM1O94992 359 aaKnown RBP13.7□□□□□ -0.22
VAPB-203ENST00000463370 TMEM191BP0C7N4 346 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 ZNF865P0CJ78 1059 aaPredicted RBP13.7□□□□□ -0.22
VAPB-203ENST00000463370 TBXAS1P24557 533 aaPredicted RBP13.7□□□□□ -0.22
VAPB-203ENST00000463370 TNNT3P45378 269 aaPredicted RBP13.7□□□□□ -0.22
VAPB-203ENST00000463370 AP3M2P53677 418 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 GUCY2DQ02846 1103 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 POU5F1BQ06416 359 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
VAPB-203ENST00000463370 CD101Q93033 1021 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
VAPB-203ENST00000463370 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 RPF1Q9H9Y2 349 aaKnown RBP13.7□□□□□ -0.22
VAPB-203ENST00000463370 CDHR5Q9HBB8 845 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 GINS2Q9Y248 185 aa13.7□□□□□ -0.22
VAPB-203ENST00000463370 CYP2B6P20813 491 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 MCM3P25205 808 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 TMOD1P28289 359 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 ASPAP45381 313 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 CARSP49589 748 aaKnown RBP13.69□□□□□ -0.22
VAPB-203ENST00000463370 CENPCQ03188 943 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 JADE1Q6IE81 842 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 C17orf99Q6UX52 265 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 MON1BQ7L1V2 547 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 ZNF677Q86XU0 584 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 SCLT1Q96NL6 688 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 FAM49AQ9H0Q0 323 aaPredicted RBP13.69□□□□□ -0.22
VAPB-203ENST00000463370 CXCL16Q9H2A7 254 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 EPB41L5Q9HCM4 733 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 CISHQ9NSE2 258 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 A6NJR5 290 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 THAP12O43422 761 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 RAP1GAPP47736 663 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 PEX5P50542 639 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 GUCY2FP51841 1108 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 BPIFB4P59827 614 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 NOMO3P69849 1222 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 TRPC3Q13507 836 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 SGSM1Q2NKQ1 1148 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 ZNF699Q32M78 642 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 SLC10A6Q3KNW5 377 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
VAPB-203ENST00000463370 DAB2IPQ5VWQ8 1189 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 MROH7Q68CQ1 1323 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 USP6NLQ92738 828 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 NIF3L1Q9GZT8 377 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 CARD9Q9H257 536 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 ERVK-5Q9HDB9 667 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 GDF3Q9NR23 364 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 EVPLQ92817 2033 aa13.69□□□□□ -0.22
VAPB-203ENST00000463370 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
VAPB-203ENST00000463370 GJB6O95452 261 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 KRT19P08727 400 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
VAPB-203ENST00000463370 CTGFP29279 349 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 TNNC1P63316 161 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 TLK2Q86UE8 772 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 ZDHHC14Q8IZN3 488 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 NXF1Q9UBU9 619 aaKnown RBP13.68□□□□□ -0.22
VAPB-203ENST00000463370 MANSC4A6NHS7 340 aaPredicted RBP13.68□□□□□ -0.22
VAPB-203ENST00000463370 ZEB2O60315 1214 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 SMIM10L2AP0DMW4 78 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 SMIM10L2BP0DMW5 78 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 MCF2P10911 925 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 OAS2P29728 719 aaKnown RBP13.68□□□□□ -0.22
VAPB-203ENST00000463370 NSFP46459 744 aaKnown RBP13.68□□□□□ -0.22
VAPB-203ENST00000463370 CDH8P55286 799 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 BEX3Q00994 111 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 SURF1Q15526 300 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 TFAP2BQ92481 460 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms