RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PAPLNO95428 1278 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 MYBP10242 640 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 ASIC1P78348 528 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 CTXN3Q4LDR2 81 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 AXDND1Q5T1B0 1012 aaPredicted RBP14.22□□□□□ -0.13
HDAC1-203ENST00000463172 DSTYKQ6XUX3 929 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 USP37Q86T82 979 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 NT5DC4Q86YG4 428 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 SUGP1Q8IWZ8 645 aaKnown RBP14.22□□□□□ -0.13
HDAC1-203ENST00000463172 CEP57L1Q8IYX8 460 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 C3orf58Q8NDZ4 430 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 NXPE3Q969Y0 559 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 HAPLN2Q9GZV7 340 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 C11orf16Q9NQ32 467 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 KBTBD4Q9NVX7 518 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 IGSF9Q9P2J2 1179 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 TUBGCP4Q9UGJ1 667 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 LIMD1Q9UGP4 676 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 MAFFQ9ULX9 164 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 C2CD2Q9Y426 696 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 TECTAO75443 2155 aa14.22□□□□□ -0.13
HDAC1-203ENST00000463172 FRMD3A2A2Y4 597 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 ANKRD63C9JTQ0 380 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 PRRG1O14668 218 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 FAM189A1O60320 539 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 PPP1R37O75864 691 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 LRG1P02750 347 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 ADRB2P07550 413 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 POU2F2P09086 479 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 GARTP22102 1010 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 ACOT2P49753 483 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 KRT85P78386 507 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 YWHAHQ04917 246 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-203ENST00000463172 SPAG1Q07617 926 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 ZBTB6Q15916 424 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 SPATA1Q5VX52 437 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 TPGS2Q68CL5 300 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 SLC8B1Q6J4K2 584 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 CD300LGQ6UXG3 332 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 BMP8AQ7Z5Y6 402 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 ZNF461Q8TAF7 563 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 SLC7A14Q8TBB6 771 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 PBXIP1Q96AQ6 731 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 KCNH6Q9H252 994 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 POLIQ9UNA4 740 aa14.21□□□□□ -0.13
HDAC1-203ENST00000463172 R3HCC1Q9Y3T6 440 aaKnown RBP14.21□□□□□ -0.13
HDAC1-203ENST00000463172 A0A087X0B3 334 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 TULP1O00294 542 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-203ENST00000463172 POLR2DO15514 142 aaKnown RBP14.2□□□□□ -0.14
HDAC1-203ENST00000463172 ODC1P11926 461 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 FSHRP23945 695 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 ARPP19P56211 112 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 DNM1Q05193 864 aaKnown RBP14.2□□□□□ -0.14
HDAC1-203ENST00000463172 E2F4Q16254 413 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 JADE1Q6IE81 842 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 SLC39A4Q6P5W5 647 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 SHC4Q6S5L8 630 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 ELMOD1Q8N336 334 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 CACTINQ8WUQ7 758 aaKnown RBP14.2□□□□□ -0.14
HDAC1-203ENST00000463172 ZNF707Q96C28 371 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-203ENST00000463172 STRA6Q9BX79 667 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 TRIM9Q9C026 710 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 DSEQ9UL01 958 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 PCDHA7Q9UN72 937 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 ANK1P16157 1881 aa14.2□□□□□ -0.14
HDAC1-203ENST00000463172 TCHHQ07283 1943 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 OR6C75A6NL08 312 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 M0QZQ0 153 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 MEFVO15553 781 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-203ENST00000463172 CPB1P15086 417 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 ATF2P15336 505 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 ROR1Q01973 937 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 TDGQ13569 410 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 MRPL58Q14197 206 aaKnown RBP14.19□□□□□ -0.14
HDAC1-203ENST00000463172 ZBTB41Q5SVQ8 909 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 RESP18Q5W5W9 173 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 ARMCX5Q6P1M9 558 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 CNNM4Q6P4Q7 775 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 HFE2Q6ZVN8 426 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 GET4Q7L5D6 327 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-203ENST00000463172 METTL23Q86XA0 190 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 SPATA32Q96LK8 384 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 ZNF560Q96MR9 790 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 PRRX2Q99811 253 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 C7orf25Q9BPX7 421 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 FAM213AQ9BRX8 229 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 EPS15L1Q9UBC2 864 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 USP25Q9UHP3 1055 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 FBXL5Q9UKA1 691 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 RCOR1Q9UKL0 485 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 KCNH3Q9ULD8 1083 aa14.19□□□□□ -0.14
HDAC1-203ENST00000463172 UBE4BO95155 1302 aa14.18□□□□□ -0.14
HDAC1-203ENST00000463172 DOCK8Q8NF50 2099 aa14.18□□□□□ -0.14
HDAC1-203ENST00000463172 EIF3DO15371 548 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC1-203ENST00000463172 CCL16O15467 120 aa14.18□□□□□ -0.14
HDAC1-203ENST00000463172 ADAM12O43184 909 aa14.18□□□□□ -0.14
HDAC1-203ENST00000463172 EXTL3O43909 919 aa14.18□□□□□ -0.14
HDAC1-203ENST00000463172 ABLIM3O94929 683 aa14.18□□□□□ -0.14
HDAC1-203ENST00000463172 OAZ2O95190 189 aa14.18□□□□□ -0.14
HDAC1-203ENST00000463172 NFICP08651 508 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms