RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 LONP2Q86WA8 852 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 SAMD3Q8N6K7 520 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 SYTL5Q8TDW5 730 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-208ENST00000463007 ART4Q93070 314 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 GINM1Q9NU53 330 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 SIP14410 1827 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 CCDC189A1A4V9 331 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 CFAP73A6NFT4 308 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
HDAC4-208ENST00000463007 ETS1P14921 441 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 PPP2R5EQ16537 467 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 ST6GALNAC4Q9H4F1 302 aa13.22□□□□□ -0.29
HDAC4-208ENST00000463007 RALAP11233 206 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 KRT10P13645 584 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 RRM1P23921 792 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-208ENST00000463007 RASA3Q14644 834 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 TTC8Q8TAM2 541 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 FBF1Q8TES7 1133 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
HDAC4-208ENST00000463007 RUNDC3BQ96NL0 473 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 SAYSD1Q9NPB0 183 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
HDAC4-208ENST00000463007 EXOC1LA0A1B0GW35 172 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 RTN2O75298 545 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 TTC4O95801 387 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 CA4P22748 312 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 BNIP1Q12981 228 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 SETDB1Q15047 1291 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 PADI6Q6TGC4 694 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 ANKMY2Q8IV38 441 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 DTX3LQ8TDB6 740 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 SEMA4DQ92854 862 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 NUDCD1Q96RS6 583 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 OSBPL1AQ9BXW6 950 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 EBF2Q9HAK2 575 aa13.21□□□□□ -0.3
HDAC4-208ENST00000463007 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
HDAC4-208ENST00000463007 NFKBIEO00221 500 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 GSTA1P08263 222 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 CTNNA2P26232 953 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 RARRES1P49788 294 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 FASTKD3Q14CZ7 662 aaKnown RBP13.2□□□□□ -0.3
HDAC4-208ENST00000463007 CGB2Q6NT52 195 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 CPXCR1Q8N123 301 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 SLC16A10Q8TF71 515 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 KREMEN1Q96MU8 473 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 NINJ2Q9NZG7 142 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
HDAC4-208ENST00000463007 NOP14P78316 857 aaKnown RBP13.2□□□□□ -0.3
HDAC4-208ENST00000463007 NBPF20Q3BBV1 942 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 GLIS1Q8NBF1 620 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 REPS2Q8NFH8 660 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 PARD3BQ8TEW8 1205 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 CNOT7Q9UIV1 285 aaKnown RBP13.2□□□□□ -0.3
HDAC4-208ENST00000463007 DIS3Q9Y2L1 958 aaKnown RBP13.2□□□□□ -0.3
HDAC4-208ENST00000463007 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 A0A0G2JMZ2 1700 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 GAS8O95995 478 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 CCND1P24385 295 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 PGM5Q15124 567 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 UGCGQ16739 394 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 FAM102BQ5T8I3 360 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 STXBP4Q6ZWJ1 553 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 LRRC37BQ96QE4 947 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 RBM15Q96T37 977 aaKnown RBP eCLIP13.2□□□□□ -0.3
HDAC4-208ENST00000463007 ZCWPW1Q9H0M4 648 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 RXFP1Q9HBX9 757 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 NPHS2Q9NP85 383 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 HSPBP1Q9NZL4 362 aa13.2□□□□□ -0.3
HDAC4-208ENST00000463007 KIF22Q14807 665 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 SEPT7Q16181 437 aaKnown RBP13.19□□□□□ -0.3
HDAC4-208ENST00000463007 P3H1Q32P28 736 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 IZUMO3Q5VZ72 239 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 PLA2G4FQ68DD2 849 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 TAS1R2Q8TE23 839 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 CKAP2Q8WWK9 683 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 SNF8Q96H20 258 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 PMM2O15305 246 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 CCNE2O96020 404 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 ABL2P42684 1182 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 WDR4P57081 412 aaKnown RBP13.19□□□□□ -0.3
HDAC4-208ENST00000463007 DYNLT1P63172 113 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 GTF2BQ00403 316 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 FMO1Q01740 532 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 BIRC2Q13490 618 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 CCDC6Q16204 474 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 ARHGEF18Q6ZSZ5 1173 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 APBB1IPQ7Z5R6 666 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-208ENST00000463007 MCF2L2Q86YR7 1114 aa13.19□□□□□ -0.3
HDAC4-208ENST00000463007 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-208ENST00000463007 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms