RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 UBE4BO95155 1302 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 GOLGA6L4A6NEF3 574 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 IL18RAPO95256 599 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 SPATA1Q5VX52 437 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 EPM2AIP1Q7L775 607 aaPredicted RBP20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 NELFCDQ8IXH7 590 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 KREMEN2Q8NCW0 462 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 GOLPH3LQ9H4A5 285 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 PLEKHA4Q9H4M7 779 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 POMKQ9H5K3 350 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 MTRRQ9UBK8 725 aa20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 MTCL1Q9Y4B5 1905 aaKnown RBP20.09■□□□□ 0.81
CDKN1A-206ENST00000462537 SYN3O14994 580 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 ADAM12O43184 909 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 C1RP00736 705 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 OR1D2P34982 312 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 POU5F1Q01860 360 aaKnown RBP20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 EHHADHQ08426 723 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 VARS2Q5ST30 1063 aaKnown RBP20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 GPD1LQ8N335 351 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 ZNF507Q8TCN5 953 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 HDAC7Q8WUI4 952 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 SUSD3Q96L08 255 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 RBAKQ9NYW8 714 aaPredicted RBP20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 C2CD2Q9Y426 696 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 CDY1Q9Y6F8 540 aa20.08■□□□□ 0.81
CDKN1A-206ENST00000462537 C2orf16Q68DN1 1984 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 FAM237AA0A1B0GTK4 181 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 CCDC195A0A1B0GUA6 201 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 LOC730098B7Z3J9 87 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 H7C4K7 107 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 EXTL3O43909 919 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 RFPL2O75678 378 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 HOXD13P35453 343 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 LILRA6Q6PI73 481 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 DSTYKQ6XUX3 929 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 GPR149Q86SP6 731 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 BRSK2Q8IWQ3 736 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 APPL2Q8NEU8 664 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 FEZF2Q8TBJ5 459 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 PCDHB8Q9UN66 801 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 NR2E1Q9Y466 385 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 BACE2Q9Y5Z0 518 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 BDP1A6H8Y1 2624 aa20.07■□□□□ 0.8
CDKN1A-206ENST00000462537 MUC3AQ02505 3323 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 PPEF2O14830 753 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 KIAA0391O15091 583 aaKnown RBP20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 KLRC4O43908 158 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 MYL1P05976 194 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 ARPP19P56211 112 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 KMT5BQ4FZB7 885 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 LIN9Q5TKA1 542 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 C9orf57Q5W0N0 161 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 KRBA2Q6ZNG9 492 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 C15orf39Q6ZRI6 1047 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 HS2ST1Q7LGA3 356 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 EFCAB13Q8IY85 973 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 CMASQ8NFW8 434 aaPredicted RBP20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 SCFD1Q8WVM8 642 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 KHSRPQ92945 711 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 DPP3Q9NY33 737 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 HSPBP1Q9NZL4 362 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 FBXW11Q9UKB1 542 aa20.06■□□□□ 0.8
CDKN1A-206ENST00000462537 CLIC2O15247 247 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 ZNF202O95125 648 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 RPN1P04843 607 aaKnown RBP20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 TFAMQ00059 246 aaKnown RBP20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 PSMD2Q13200 908 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 RAB33AQ14088 237 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 CTXN3Q4LDR2 81 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 ZNF280DQ6N043 979 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 RSPO2Q6UXX9 243 aaPredicted RBP20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 NT5DC4Q86YG4 428 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 RNF135Q8IUD6 432 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 SMG7Q92540 1137 aaKnown RBP20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 CCDC47Q96A33 483 aaKnown RBP20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 PIDD1Q9HB75 910 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 ZDHHC7Q9NXF8 308 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 TIMM13Q9Y5L4 95 aaPredicted RBP20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 NCOR1O75376 2440 aa20.05■□□□□ 0.8
CDKN1A-206ENST00000462537 M0QZQ0 153 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 ZMYND10O75800 440 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 PRR29P0C7W0 189 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 CYP2J2P51589 502 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 LILRA4P59901 499 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 STK4Q13043 487 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 CCDC149Q6ZUS6 474 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 USP37Q86T82 979 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 CACTINQ8WUQ7 758 aaKnown RBP20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 CCDC34Q96HJ3 373 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 EPHX3Q9H6B9 360 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 AGPAT3Q9NRZ7 376 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 DENND4AQ7Z401 1863 aa20.04■□□□□ 0.8
CDKN1A-206ENST00000462537 ANO9A1A5B4 782 aa20.03■□□□□ 0.8
CDKN1A-206ENST00000462537 ZNF233A6NK53 670 aa20.03■□□□□ 0.8
CDKN1A-206ENST00000462537 PIRO00625 290 aa20.03■□□□□ 0.8
CDKN1A-206ENST00000462537 TGFB1I1O43294 461 aa20.03■□□□□ 0.8
CDKN1A-206ENST00000462537 C8AP07357 584 aa20.03■□□□□ 0.8
CDKN1A-206ENST00000462537 ODC1P11926 461 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms