RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 CFAP73A6NFT4 308 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ASAP2O43150 1006 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 SHBGP04278 402 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ZNF286BP0CG31 522 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 UCHL3P15374 230 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 KCNJ2P63252 427 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ALCAMQ13740 583 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ITIH4Q14624 930 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 TAF1CQ15572 869 aaPredicted RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 TARBP2Q15633 366 aaKnown RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ASIC2Q16515 512 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 CAPRIN2Q6IMN6 1127 aaKnown RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 MAMDC4Q6UXC1 1216 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 PIGWQ7Z7B1 504 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 CCDC26Q8TAB7 109 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 MORC4Q8TE76 937 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ZBTB45Q96K62 511 aaPredicted RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 NIFKQ9BYG3 293 aaKnown RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ST6GALNAC4Q9H4F1 302 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 NRBP2Q9NSY0 501 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 UTP11Q9Y3A2 253 aaKnown RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 EMSYQ7Z589 1322 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 TTLL13PA6NNM8 815 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 CCDC188H7C350 402 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ADCY6O43306 1168 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ARHGAP1Q07960 439 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 PLEKHH3Q7Z736 793 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 GTF3C2Q8WUA4 911 aaPredicted RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 SPIRE2Q8WWL2 714 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ATXN2LQ8WWM7 1075 aaKnown RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 POMGNT1Q8WZA1 660 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 PRCCQ92733 491 aaPredicted RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 FMO2Q99518 471 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 PRMT1Q99873 361 aaKnown RBP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 TRIM51Q9BSJ1 452 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 MKNK1Q9BUB5 465 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 RNPEPQ9H4A4 650 aa12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.81□□□□□ -0.36
TNRC6A-204ENST00000462400 ENO4A6NNW6 628 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 ZBTB42B2RXF5 422 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 HARSP12081 509 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 IFNAR2P48551 515 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 EIF3BP55884 814 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 CAPSQ13938 189 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 ZNF268Q14587 947 aaPredicted RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 FAM110CQ1W6H9 321 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 SEZ6Q53EL9 994 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 C1orf220Q5T0J3 134 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 CDCA2Q69YH5 1023 aaPredicted RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 SAPCD2Q86UD0 394 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 SLC9A9Q8IVB4 645 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 RNF217Q8TC41 542 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 AFG1LQ8WV93 481 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 LENG1Q96BZ8 264 aaPredicted RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 MAML3Q96JK9 1138 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 NTPCRQ9BSD7 190 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 FAM114A2Q9NRY5 505 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 EVPLQ92817 2033 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 KRT13P13646 458 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 NQO1P15559 274 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 ARL2P36404 184 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 VAMP7P51809 220 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 INHBEP58166 350 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 MYL7Q01449 175 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 GRB14Q14449 540 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 SNRNP35Q16560 246 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 LMBRD2Q68DH5 695 aaPredicted RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 LRRC57Q8N9N7 239 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 PRPF31Q8WWY3 499 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 KATNBL1Q9H079 304 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 SLITRK6Q9H5Y7 841 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 INTS9Q9NV88 658 aaKnown RBP12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 ARHGAP28Q9P2N2 729 aa12.8□□□□□ -0.36
TNRC6A-204ENST00000462400 UBOX5O94941 541 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 PTK2Q05397 1052 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 DAAM2Q86T65 1068 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 FAM213AQ9BRX8 229 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 HAPLN2Q9GZV7 340 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 ADAM7Q9H2U9 754 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 ANKFY1Q9P2R3 1169 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 EXOC7Q9UPT5 735 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 A8MUI8 341 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 STRNO43815 780 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 PPFIA2O75334 1257 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 LGR5O75473 907 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 MMP13P45452 471 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 CLCN3P51790 818 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 WNT7BP56706 349 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 CCL14Q16627 93 aa12.79□□□□□ -0.36
TNRC6A-204ENST00000462400 ARHGAP44Q17R89 818 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms