RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ZSCAN5CA6NGD5 496 aaPredicted RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 TEX33O43247 280 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 GPAA1O43292 621 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 ATP9AO75110 1047 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 TSPY3P0CV98 308 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 TSPY8P0CW00 308 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 RARAP10276 462 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 VDRP11473 427 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 COL6A2P12110 1019 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 CSF2RAP15509 400 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 TAL1P17542 331 aaPredicted RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 CASP14P31944 242 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 PTDSS1P48651 473 aaKnown RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 KIF11P52732 1056 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 PNOCQ13519 176 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 USH1GQ495M9 461 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.26□□□□□ -1.41
CLK1-207ENST00000461981 BPHLQ86WA6 291 aaPredicted RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 TREML1Q86YW5 311 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 CMTR2Q8IYT2 770 aaKnown RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 MDM1Q8TC05 714 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 DQX1Q8TE96 717 aaKnown RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 ANKRD27Q96NW4 1050 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 LRFN3Q9BTN0 628 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 TPK1Q9H3S4 243 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 ZSWIM6Q9HCJ5 1215 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 DKK3Q9UBP4 350 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 SLC12A6Q9UHW9 1150 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 LZTS1Q9Y250 596 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 KDM3AQ9Y4C1 1321 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 CYP2D6P10635 497 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 PORP16435 677 aaPredicted RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 SLC1A4P43007 532 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 RXRGP48443 463 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 PDE4DQ08499 809 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 ZNF543Q08ER8 600 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 DGKDQ16760 1214 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 KCTD21Q4G0X4 260 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 LRRC8BQ6P9F7 803 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 TMEM184AQ6ZMB5 413 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 LRRC8DQ7L1W4 858 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 CABP7Q86V35 215 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 SPATA24Q86W54 205 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 ADHFE1Q8IWW8 467 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 GPR65Q8IYL9 337 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 IQCKQ8N0W5 287 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 MYO1HQ8N1T3 1032 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 CEP70Q8NHQ1 597 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 NSUN6Q8TEA1 469 aaKnown RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 HSPBAP1Q96EW2 488 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 CHMP6Q96FZ7 201 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 CEP95Q96GE4 821 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 PHF12Q96QT6 1004 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 EIF2AQ9BY44 585 aaKnown RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 CEP44Q9C0F1 390 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 FAM192AQ9GZU8 254 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 NSUN3Q9H649 340 aaKnown RBP6.26□□□□□ -1.41
CLK1-207ENST00000461981 CNNM2Q9H8M5 875 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 EHD2Q9NZN4 543 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 NFE2L3Q9Y4A8 694 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 NEDD4P46934 1319 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 COL1A2P08123 1366 aa6.26□□□□□ -1.41
CLK1-207ENST00000461981 H3BNC9 293 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 GCOM1H8Y6P7 765 aaPredicted RBP6.25□□□□□ -1.41
CLK1-207ENST00000461981 MYZAPP0CAP1 466 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 CALB2P22676 271 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 VAV2P52735 878 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 WDR5P61964 334 aaKnown RBP6.25□□□□□ -1.41
CLK1-207ENST00000461981 IKBKEQ14164 716 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 ZYXQ15942 572 aaKnown RBP6.25□□□□□ -1.41
CLK1-207ENST00000461981 FAM209AQ5JX71 171 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 CCDC122Q5T0U0 273 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 IQCEQ6IPM2 695 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 RIBC1Q8N443 379 aaPredicted RBP6.25□□□□□ -1.41
CLK1-207ENST00000461981 DCLK2Q8N568 766 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 SDR42E1Q8WUS8 393 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 SEPT8Q92599 483 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 FERMT2Q96AC1 680 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 DYNLL2Q96FJ2 89 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 CDHR1Q96JP9 859 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 SENP7Q9BQF6 1050 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 TIPINQ9BVW5 301 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 FTHL17Q9BXU8 183 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 MIS12Q9H081 205 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 NAPBQ9H115 298 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 SEMA4AQ9H3S1 761 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 UBE2ZQ9H832 354 aaPredicted RBP6.25□□□□□ -1.41
CLK1-207ENST00000461981 RNPEPL1Q9HAU8 725 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 EPB41L4AQ9HCS5 686 aaPredicted RBP6.25□□□□□ -1.41
CLK1-207ENST00000461981 SAMD15Q9P1V8 674 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 ITGB1BP2Q9UKP3 347 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 CCPG1Q9ULG6 757 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 COMMD3-BMI1R4GMX3 469 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 MYADML2A6NDP7 307 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 SRRM3A6NNA2 597 aaPredicted RBP6.25□□□□□ -1.41
CLK1-207ENST00000461981 SFI1A8K8P3 1242 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 KDM1AO60341 852 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 LPXNO60711 386 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 TJP3O95049 919 aa6.25□□□□□ -1.41
CLK1-207ENST00000461981 LCA5LO95447 670 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms