RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TMX3Q96JJ7 454 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 ZC3H10Q96K80 434 aaKnown RBP4.74□□□□□ -1.65
CLK1-206ENST00000461326 TNIP3Q96KP6 325 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 ELAC2Q9BQ52 826 aaKnown RBP4.74□□□□□ -1.65
CLK1-206ENST00000461326 CHMP4AQ9BY43 222 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 LRRC27Q9C0I9 530 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 CNNM1Q9NRU3 951 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 SIDT1Q9NXL6 827 aaKnown RBP4.74□□□□□ -1.65
CLK1-206ENST00000461326 FAM50BQ9Y247 325 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 SIK3Q9Y2K2 1263 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 PAXBP1Q9Y5B6 917 aa4.74□□□□□ -1.65
CLK1-206ENST00000461326 MYBBP1AQ9BQG0 1328 aaKnown RBP4.73□□□□□ -1.65
CLK1-206ENST00000461326 SLC26A4O43511 780 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 RHOBTB3O94955 611 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 TYRP14679 529 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 DDCP20711 480 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 SMARCA1P28370 1054 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 TM4SF4P48230 202 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 FLT3LGP49771 235 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 NEK3P51956 506 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 CTXN1P60606 82 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 NKX6-1P78426 367 aaPredicted RBP4.73□□□□□ -1.65
CLK1-206ENST00000461326 ATP8B2P98198 1209 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 TARDBPQ13148 414 aaKnown RBP eCLIP4.73□□□□□ -1.65
CLK1-206ENST00000461326 MTM1Q13496 603 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 RRP1BQ14684 758 aaKnown RBP4.73□□□□□ -1.65
CLK1-206ENST00000461326 LLGL1Q15334 1064 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 IL31Q6EBC2 164 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 ZNF572Q7Z3I7 529 aaPredicted RBP4.73□□□□□ -1.65
CLK1-206ENST00000461326 HEATR3Q7Z4Q2 680 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 CMTM4Q8IZR5 234 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 LILRA3Q8N6C8 439 aaPredicted RBP4.73□□□□□ -1.65
CLK1-206ENST00000461326 ANKRD53Q8N9V6 530 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 CCHCR1Q8TD31 782 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 BRIX1Q8TDN6 353 aaKnown RBP4.73□□□□□ -1.65
CLK1-206ENST00000461326 SLC35A4Q96G79 324 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 POLR3GLQ9BT43 218 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 NLRC4Q9NPP4 1024 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 CHST12Q9NRB3 414 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 ING3Q9NXR8 418 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 PTGFRNQ9P2B2 879 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 AJAP1Q9UKB5 411 aaPredicted RBP4.73□□□□□ -1.65
CLK1-206ENST00000461326 PHTF1Q9UMS5 762 aa4.73□□□□□ -1.65
CLK1-206ENST00000461326 CFAP69A5D8W1 941 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 ISM1B1AKI9 464 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 NUDT3O95989 172 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 MYBP10242 640 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 MALP21145 153 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 PTGS2P35354 604 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 GZMKP49863 264 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 NPEPPSP55786 919 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 BTKQ06187 659 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 SAFB2Q14151 953 aaKnown RBP eCLIP4.72□□□□□ -1.65
CLK1-206ENST00000461326 EXOC8Q8IYI6 725 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 GPR135Q8IZ08 494 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 IL17RAQ96F46 866 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 SUCLG2Q96I99 432 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 MPHOSPH9Q99550 1183 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 SELENOOQ9BVL4 669 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 BHMT2Q9H2M3 363 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 SARS2Q9NP81 518 aaKnown RBP4.72□□□□□ -1.65
CLK1-206ENST00000461326 IL23AQ9NPF7 189 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 PNPOQ9NVS9 261 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 ABCF2Q9UG63 623 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 TPCN1Q9ULQ1 816 aa4.72□□□□□ -1.65
CLK1-206ENST00000461326 A0A1W2PPL8 197 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 B5MCH6 92 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 H3BUI4 141 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 PJA2O43164 708 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 PQBP1O60828 265 aaKnown RBP4.71□□□□□ -1.66
CLK1-206ENST00000461326 LDHAP00338 332 aaKnown RBP4.71□□□□□ -1.66
CLK1-206ENST00000461326 GCP02774 474 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 AMY1AP04745 511 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 SLC5A1P13866 664 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 ALOX15P16050 662 aaPredicted RBP4.71□□□□□ -1.66
CLK1-206ENST00000461326 PTPN7P35236 360 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 ADAM8P78325 824 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 ATP2C1P98194 919 aaPredicted RBP4.71□□□□□ -1.66
CLK1-206ENST00000461326 CREMQ03060 361 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 PLS1Q14651 629 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 KHDC1Q4VXA5 237 aaKnown RBP4.71□□□□□ -1.66
CLK1-206ENST00000461326 FAM47AQ5JRC9 791 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 DACT2Q5SW24 774 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 PRAMEF14Q5SWL7 426 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 EMC10Q5UCC4 262 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 OTUD7BQ6GQQ9 843 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 TOGARAM2Q6ZUX3 1019 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 DPP9Q86TI2 863 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 PLXDC1Q8IUK5 500 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 ANKRD35Q8N283 1001 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 SHCBP1Q8NEM2 672 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 OR5M3Q8NGP4 307 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 OR14K1Q8NGZ2 314 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 PGBD4Q96DM1 585 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 APIPQ96GX9 242 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 TMEM176AQ96HP8 235 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 DMRTA2Q96SC8 542 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 MYD88Q99836 296 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 C22orf23Q9BZE7 217 aa4.71□□□□□ -1.66
CLK1-206ENST00000461326 ENKD1Q9H0I2 346 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms