RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 UPP1Q16831 310 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 RESP18Q5W5W9 173 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 SLC39A4Q6P5W5 647 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 GPR152Q8TDT2 470 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 HDAC7Q8WUI4 952 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 PLEKHA5Q9HAU0 1116 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 CA14Q9ULX7 337 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 STYXL1Q9Y6J8 313 aa20.05■□□□□ 0.8
COL9A2-205ENST00000461118 TGM5O43548 720 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 ADRB2P07550 413 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 LAMP2P13473 410 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 MATR3P43243 847 aaKnown RBP eCLIP20.04■□□□□ 0.8
COL9A2-205ENST00000461118 AMPD3Q01432 767 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 ELAVL2Q12926 359 aaKnown RBP20.04■□□□□ 0.8
COL9A2-205ENST00000461118 SEZ6Q53EL9 994 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 CNNM4Q6P4Q7 775 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 PALB2Q86YC2 1186 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 STAMQ92783 540 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 NXPE3Q969Y0 559 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 DDX27Q96GQ7 796 aaKnown RBP20.04■□□□□ 0.8
COL9A2-205ENST00000461118 MRPL44Q9H9J2 332 aaKnown RBP20.04■□□□□ 0.8
COL9A2-205ENST00000461118 TBC1D17Q9HA65 648 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.04■□□□□ 0.8
COL9A2-205ENST00000461118 PANK4Q9NVE7 773 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 FAM13BQ9NYF5 915 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 ATP6V1DQ9Y5K8 247 aa20.04■□□□□ 0.8
COL9A2-205ENST00000461118 TTC26A0AVF1 554 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 OGTO15294 1046 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 IDEP14735 1019 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 CLCNKBP51801 687 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 SOX4Q06945 474 aaPredicted RBP20.03■□□□□ 0.8
COL9A2-205ENST00000461118 HTR4Q13639 388 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 SLFN12LQ6IEE8 588 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 PHLDB3Q6NSJ2 640 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 CD300LGQ6UXG3 332 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 DHX58Q96C10 678 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 TSPAN18Q96SJ8 248 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 TRIM9Q9C026 710 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 PLEKHA4Q9H4M7 779 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 MAGEF1Q9HAY2 307 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 FNIP2Q9P278 1114 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 DPP7Q9UHL4 492 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 PCDHB13Q9Y5F0 798 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 R4GN57 208 aa20.03■□□□□ 0.8
COL9A2-205ENST00000461118 CEP250Q9BV73 2442 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 ANKRD63C9JTQ0 380 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 POLR2DO15514 142 aaKnown RBP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 B3GAT3O94766 335 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 GLULP15104 373 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 RPL9P32969 192 aaKnown RBP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 KRT85P78386 507 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 CREMQ03060 361 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 ALCAMQ13740 583 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 CCDC65Q8IXS2 484 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 ST13P5Q8NFI4 369 aaPredicted RBP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 HASPINQ8TF76 798 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 LEO1Q8WVC0 666 aaPredicted RBP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 RIN2Q8WYP3 895 aaPredicted RBP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 RMDN1Q96DB5 314 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 PYM1Q9BRP8 204 aaKnown RBP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 TTPALQ9BTX7 342 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 PRKD2Q9BZL6 878 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 SEMA4AQ9H3S1 761 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 GOLGA2P5Q9HBQ8 144 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 SLC2A4RGQ9NR83 387 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 ZDHHC7Q9NXF8 308 aa20.02■□□□□ 0.8
COL9A2-205ENST00000461118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.02■□□□□ 0.8
COL9A2-205ENST00000461118 PDCD11Q14690 1871 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 LMNAP02545 664 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 DCNP07585 359 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 CXCL8P10145 99 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 RPL17P18621 184 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 TNFSF9P41273 254 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 POU5F1Q01860 360 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 ZBTB6Q15916 424 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 RTP2Q5QGT7 225 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 L1TD1Q5T7N2 865 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 FAM171A1Q5VUB5 890 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 ADALQ6DHV7 355 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 PIK3R5Q8WYR1 880 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 SPATA32Q96LK8 384 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 ACCSQ96QU6 501 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 C7orf25Q9BPX7 421 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 MSTO1Q9BUK6 570 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 RPP25Q9BUL9 199 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 TBC1D7Q9P0N9 293 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 CPSF3Q9UKF6 684 aaKnown RBP20.01■□□□□ 0.79
COL9A2-205ENST00000461118 KCNH3Q9ULD8 1083 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 EXOC7Q9UPT5 735 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 NUMBLQ9Y6R0 609 aa20.01■□□□□ 0.79
COL9A2-205ENST00000461118 STK25O00506 426 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 TRAPPC3O43617 180 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 FGFR3P22607 806 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 CMA1P23946 247 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 IGFBP6P24592 240 aaPredicted RBP20■□□□□ 0.79
COL9A2-205ENST00000461118 POSTNQ15063 836 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 ENOX2Q16206 610 aaKnown RBP20■□□□□ 0.79
COL9A2-205ENST00000461118 ZBTB41Q5SVQ8 909 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 PDXDC1Q6P996 788 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms