RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 NFKBIBQ15653 356 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 PTPN14Q15678 1187 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 CT47A1Q5JQC4 288 aaPredicted RBP8.84□□□□□ -0.99
SND1-202ENST00000461056 RTP2Q5QGT7 225 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 KIAA0319Q5VV43 1072 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 TDRD10Q5VZ19 366 aaKnown RBP8.84□□□□□ -0.99
SND1-202ENST00000461056 LMBRD2Q68DH5 695 aaPredicted RBP8.84□□□□□ -0.99
SND1-202ENST00000461056 C11orf57Q6ZUT1 292 aaPredicted RBP8.84□□□□□ -0.99
SND1-202ENST00000461056 WDR49Q8IV35 697 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 POF1BQ8WVV4 589 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 MYLIPQ8WY64 445 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 EEF2KMTQ96G04 330 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 DDX27Q96GQ7 796 aaKnown RBP8.84□□□□□ -0.99
SND1-202ENST00000461056 CEP63Q96MT8 703 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 FAM161BQ96MY7 647 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 POP1Q99575 1024 aaKnown RBP8.84□□□□□ -0.99
SND1-202ENST00000461056 MTMR12Q9C0I1 747 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 RXFP1Q9HBX9 757 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 ADAM28Q9UKQ2 775 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 CTNND2Q9UQB3 1225 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 FAN1Q9Y2M0 1017 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 PCDHB12Q9Y5F1 795 aa8.84□□□□□ -0.99
SND1-202ENST00000461056 C2orf71A6NGG8 1288 aa8.83□□□□□ -1
SND1-202ENST00000461056 HIDE1A8MVS5 230 aa8.83□□□□□ -1
SND1-202ENST00000461056 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
SND1-202ENST00000461056 SOD2P04179 222 aa8.83□□□□□ -1
SND1-202ENST00000461056 ALDH2P05091 517 aa8.83□□□□□ -1
SND1-202ENST00000461056 CTSAP10619 480 aa8.83□□□□□ -1
SND1-202ENST00000461056 PSMC2P35998 433 aaKnown RBP8.83□□□□□ -1
SND1-202ENST00000461056 LILRA4P59901 499 aa8.83□□□□□ -1
SND1-202ENST00000461056 DSG1Q02413 1049 aa8.83□□□□□ -1
SND1-202ENST00000461056 NCAPHQ15003 741 aa8.83□□□□□ -1
SND1-202ENST00000461056 ZACNQ401N2 412 aa8.83□□□□□ -1
SND1-202ENST00000461056 TIGD5Q53EQ6 642 aa8.83□□□□□ -1
SND1-202ENST00000461056 CAVIN1Q6NZI2 390 aaKnown RBP8.83□□□□□ -1
SND1-202ENST00000461056 FUT10Q6P4F1 479 aa8.83□□□□□ -1
SND1-202ENST00000461056 RSPO2Q6UXX9 243 aaPredicted RBP8.83□□□□□ -1
SND1-202ENST00000461056 TRAPPC11Q7Z392 1133 aa8.83□□□□□ -1
SND1-202ENST00000461056 FILIP1Q7Z7B0 1213 aa8.83□□□□□ -1
SND1-202ENST00000461056 ADGRD2Q7Z7M1 963 aa8.83□□□□□ -1
SND1-202ENST00000461056 TRIM59Q8IWR1 403 aa8.83□□□□□ -1
SND1-202ENST00000461056 FAM186BQ8IYM0 893 aa8.83□□□□□ -1
SND1-202ENST00000461056 LRRC52Q8N7C0 313 aa8.83□□□□□ -1
SND1-202ENST00000461056 MRPL43Q8N983 215 aaKnown RBP8.83□□□□□ -1
SND1-202ENST00000461056 VN1R2Q8NFZ6 395 aa8.83□□□□□ -1
SND1-202ENST00000461056 SLC35C1Q96A29 364 aa8.83□□□□□ -1
SND1-202ENST00000461056 SUSD3Q96L08 255 aa8.83□□□□□ -1
SND1-202ENST00000461056 B3GALT6Q96L58 329 aa8.83□□□□□ -1
SND1-202ENST00000461056 VRTNQ9H8Y1 702 aa8.83□□□□□ -1
SND1-202ENST00000461056 TLR9Q9NR96 1032 aa8.83□□□□□ -1
SND1-202ENST00000461056 DPP3Q9NY33 737 aa8.83□□□□□ -1
SND1-202ENST00000461056 ITGA11Q9UKX5 1188 aa8.83□□□□□ -1
SND1-202ENST00000461056 ANK1P16157 1881 aa8.83□□□□□ -1
SND1-202ENST00000461056 SF3B1O75533 1304 aaKnown RBP eCLIP8.82□□□□□ -1
SND1-202ENST00000461056 ATG2AQ2TAZ0 1938 aa8.82□□□□□ -1
SND1-202ENST00000461056 I3L4J1 428 aa8.82□□□□□ -1
SND1-202ENST00000461056 IKBKBO14920 756 aa8.82□□□□□ -1
SND1-202ENST00000461056 CETN3O15182 167 aa8.82□□□□□ -1
SND1-202ENST00000461056 PMM2O15305 246 aa8.82□□□□□ -1
SND1-202ENST00000461056 B3GAT3O94766 335 aa8.82□□□□□ -1
SND1-202ENST00000461056 CYP11A1P05108 521 aa8.82□□□□□ -1
SND1-202ENST00000461056 TRIM49P0CI25 452 aa8.82□□□□□ -1
SND1-202ENST00000461056 TRIM49CP0CI26 452 aa8.82□□□□□ -1
SND1-202ENST00000461056 CHRM1P11229 460 aaPredicted RBP8.82□□□□□ -1
SND1-202ENST00000461056 ZNF18P17022 549 aa8.82□□□□□ -1
SND1-202ENST00000461056 PTMSP20962 102 aa8.82□□□□□ -1
SND1-202ENST00000461056 RPL13P26373 211 aaKnown RBP8.82□□□□□ -1
SND1-202ENST00000461056 BRCC3P46736 316 aa8.82□□□□□ -1
SND1-202ENST00000461056 VAMP7P51809 220 aa8.82□□□□□ -1
SND1-202ENST00000461056 STX17P56962 302 aa8.82□□□□□ -1
SND1-202ENST00000461056 TFAMQ00059 246 aaKnown RBP8.82□□□□□ -1
SND1-202ENST00000461056 TYRO3Q06418 890 aa8.82□□□□□ -1
SND1-202ENST00000461056 BFSP1Q12934 665 aa8.82□□□□□ -1
SND1-202ENST00000461056 STIM1Q13586 685 aa8.82□□□□□ -1
SND1-202ENST00000461056 DUOXA2Q1HG44 320 aa8.82□□□□□ -1
SND1-202ENST00000461056 CTC1Q2NKJ3 1217 aa8.82□□□□□ -1
SND1-202ENST00000461056 IER5LQ5T953 404 aa8.82□□□□□ -1
SND1-202ENST00000461056 CDKAL1Q5VV42 579 aa8.82□□□□□ -1
SND1-202ENST00000461056 KLHL10Q6JEL2 608 aa8.82□□□□□ -1
SND1-202ENST00000461056 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.82□□□□□ -1
SND1-202ENST00000461056 INTS8Q75QN2 995 aaKnown RBP8.82□□□□□ -1
SND1-202ENST00000461056 SV2AQ7L0J3 742 aa8.82□□□□□ -1
SND1-202ENST00000461056 FRMD5Q7Z6J6 570 aa8.82□□□□□ -1
SND1-202ENST00000461056 VPS52Q8N1B4 723 aa8.82□□□□□ -1
SND1-202ENST00000461056 RDH13Q8NBN7 331 aa8.82□□□□□ -1
SND1-202ENST00000461056 BEST2Q8NFU1 509 aa8.82□□□□□ -1
SND1-202ENST00000461056 LNX1Q8TBB1 728 aaPredicted RBP8.82□□□□□ -1
SND1-202ENST00000461056 HASPINQ8TF76 798 aa8.82□□□□□ -1
SND1-202ENST00000461056 AUTS2Q8WXX7 1259 aa8.82□□□□□ -1
SND1-202ENST00000461056 PIK3R5Q8WYR1 880 aa8.82□□□□□ -1
SND1-202ENST00000461056 CCDC127Q96BQ5 260 aa8.82□□□□□ -1
SND1-202ENST00000461056 TMEM169Q96HH4 297 aa8.82□□□□□ -1
SND1-202ENST00000461056 RTP3Q9BQQ7 232 aa8.82□□□□□ -1
SND1-202ENST00000461056 COLEC11Q9BWP8 271 aa8.82□□□□□ -1
SND1-202ENST00000461056 GDAP2Q9NXN4 497 aa8.82□□□□□ -1
SND1-202ENST00000461056 STK39Q9UEW8 545 aa8.82□□□□□ -1
SND1-202ENST00000461056 STXBP5LQ9Y2K9 1186 aa8.82□□□□□ -1
SND1-202ENST00000461056 COQ4Q9Y3A0 265 aa8.82□□□□□ -1
SND1-202ENST00000461056 PDCD11Q14690 1871 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms