RNA–Protein interactions for RNA: ENST00000460941.1

CCDC136-204, Transcript of coiled-coil domain containing 136, humanhuman

TSL 4

Gene CCDC136, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136-204ENST00000460941 SUSD3Q96L08 255 aa13.22□□□□□ -0.29
CCDC136-204ENST00000460941 TIGD1Q96MW7 591 aa13.22□□□□□ -0.29
CCDC136-204ENST00000460941 RMND1Q9NWS8 449 aa13.22□□□□□ -0.29
CCDC136-204ENST00000460941 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
CCDC136-204ENST00000460941 GRXCR2A6NFK2 248 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
CCDC136-204ENST00000460941 SYN3O14994 580 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 MBTPS2O43462 519 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 SMC2O95347 1197 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 GLUD1P00367 558 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 RPL17P18621 184 aaKnown RBP13.21□□□□□ -0.29
CCDC136-204ENST00000460941 PAX3P23760 479 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 IGFBP6P24592 240 aaPredicted RBP13.21□□□□□ -0.29
CCDC136-204ENST00000460941 TKTP29401 623 aaKnown RBP13.21□□□□□ -0.29
CCDC136-204ENST00000460941 PNOCQ13519 176 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 SNRNP35Q16560 246 aaKnown RBP13.21□□□□□ -0.29
CCDC136-204ENST00000460941 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 CBWD2Q8IUF1 395 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 XXYLT1Q8NBI6 393 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 LNX1Q8TBB1 728 aaPredicted RBP13.21□□□□□ -0.29
CCDC136-204ENST00000460941 FBXL18Q96ME1 805 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 MTRRQ9UBK8 725 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 TTC28Q96AY4 2481 aa13.21□□□□□ -0.29
CCDC136-204ENST00000460941 TCF20Q9UGU0 1960 aaKnown RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 PDXKO00764 312 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 CLIC2O15247 247 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 GADD45BO75293 160 aaPredicted RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 C1RP00736 705 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 IL9P15248 144 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 WNT7BP56706 349 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 UBE2HP62256 183 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 TFAMQ00059 246 aaKnown RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 SURF1Q15526 300 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 SYCE2Q6PIF2 218 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 TMEM130Q8N3G9 435 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 APPL2Q8NEU8 664 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 SMARCE1Q969G3 411 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 GSDMAQ96QA5 445 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 UHRF1Q96T88 793 aaPredicted RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 KCTD10Q9H3F6 313 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 SFXN1Q9H9B4 322 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 PDE11AQ9HCR9 933 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 DPP3Q9NY33 737 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 USP15Q9Y4E8 981 aaPredicted RBP13.2□□□□□ -0.3
CCDC136-204ENST00000460941 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 TSC2P49815 1807 aa13.2□□□□□ -0.3
CCDC136-204ENST00000460941 ARHGEF37A1IGU5 675 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 M0QZQ0 153 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 PPEF2O14830 753 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 EXOC3O60645 756 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 TMEM191BP0C7N4 346 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 AARSP49588 968 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC136-204ENST00000460941 ITIH3Q06033 890 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
CCDC136-204ENST00000460941 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 ELOA2Q8IYF1 753 aaPredicted RBP13.19□□□□□ -0.3
CCDC136-204ENST00000460941 GUF1Q8N442 669 aaKnown RBP13.19□□□□□ -0.3
CCDC136-204ENST00000460941 ZNF560Q96MR9 790 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 COL25A1Q9BXS0 654 aaPredicted RBP13.19□□□□□ -0.3
CCDC136-204ENST00000460941 GTPBP4Q9BZE4 634 aaKnown RBP13.19□□□□□ -0.3
CCDC136-204ENST00000460941 MTMR12Q9C0I1 747 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 ITGA11Q9UKX5 1188 aa13.19□□□□□ -0.3
CCDC136-204ENST00000460941 H7C4K7 107 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 PIRO00625 290 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 TGM5O43548 720 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 CALUO43852 315 aaPredicted RBP13.18□□□□□ -0.3
CCDC136-204ENST00000460941 TNNC2P02585 160 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 NR3C1P04150 777 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 ITGB3P05106 788 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 ODC1P11926 461 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 OR1D2P34982 312 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 PNPLA4P41247 253 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 TAF6P49848 677 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 LILRA4P59901 499 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 YWHAHQ04917 246 aaPredicted RBP13.18□□□□□ -0.3
CCDC136-204ENST00000460941 CYP24A1Q07973 514 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
CCDC136-204ENST00000460941 PSMD6Q15008 389 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 SV2CQ496J9 727 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
CCDC136-204ENST00000460941 ZNF280DQ6N043 979 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 WDR49Q8IV35 697 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 SLC9A9Q8IVB4 645 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 C1orf127Q8N9H9 656 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
CCDC136-204ENST00000460941 SUSD6Q92537 303 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms