RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 KHDC1LQ5JSQ8 128 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 GJC2Q5T442 439 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 PGBD2Q6P3X8 592 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 GGT6Q6P531 493 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 LVRNQ6Q4G3 990 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 GADL1Q6ZQY3 521 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 CXXC5Q7LFL8 322 aaKnown RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 PCGF5Q86SE9 256 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 SYTL1Q8IYJ3 562 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 BCL6BQ8N143 479 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 IFI44Q8TCB0 444 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 BRI3BPQ8WY22 251 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 TMEM41AQ96HV5 264 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 WDR92Q96MX6 357 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 LRRC37BQ96QE4 947 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 UHRF1Q96T88 793 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 TTLL2Q9BWV7 592 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 SSBP3Q9BWW4 388 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 C1QTNF3Q9BXJ4 246 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 TMX4Q9H1E5 349 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 SARS2Q9NP81 518 aaKnown RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.54□□□□□ -1.84
HPS3-203ENST00000460822 SWAP70Q9UH65 585 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 PCDHA1Q9Y5I3 950 aa3.54□□□□□ -1.84
HPS3-203ENST00000460822 MYBBP1AQ9BQG0 1328 aaKnown RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 A0A1W2PPC4 97 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 M0R3H8 397 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 GPR42O15529 346 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 ADCY6O43306 1168 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 ZNF623O75123 536 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 PHF2O75151 1096 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 ARIH2O95376 493 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 GAAP10253 952 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 HARSP12081 509 aaKnown RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 HSD3B1P14060 373 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 HNRNPLP14866 589 aaKnown RBP eCLIP3.53□□□□□ -1.846e-20■■■■■ 34.7
HPS3-203ENST00000460822 HSPA7P48741 367 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 RAC3P60763 192 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 TLE1Q04724 770 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 SIM2Q14190 667 aaPredicted RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 ICAM4Q14773 271 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 PRR16Q569H4 304 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 ZNF585AQ6P3V2 769 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 PPP1R3BQ86XI6 285 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 ZGPATQ8N5A5 531 aaKnown RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 PIK3C3Q8NEB9 887 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 OR10H5Q8NGA6 315 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 SH3RF3Q8TEJ3 882 aaPredicted RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 SNX33Q8WV41 574 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 GCC1Q96CN9 775 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 ZC3H10Q96K80 434 aaKnown RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 EIF2AK1Q9BQI3 630 aaKnown RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 KLC2Q9H0B6 622 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 C12orf65Q9H3J6 166 aaKnown RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 ZHX3Q9H4I2 956 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 LDAHQ9H6V9 325 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 TLR9Q9NR96 1032 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 CNNM1Q9NRU3 951 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 PIH1D1Q9NWS0 290 aaKnown RBP3.53□□□□□ -1.84
HPS3-203ENST00000460822 RRN3Q9NYV6 651 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 CDC42EP3Q9UKI2 254 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 CEP83Q9Y592 693 aa3.53□□□□□ -1.84
HPS3-203ENST00000460822 MUSKO15146 869 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 FFAR2O15552 330 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 SKAP2O75563 359 aaPredicted RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 FSBPO95073 299 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 CNOT4O95628 575 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 CSTBP04080 98 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 AMY1AP04745 511 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 LTA4HP09960 611 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 SMARCA1P28370 1054 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 PDIA3P30101 505 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 SREBF1P36956 1147 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 SELENOPP49908 381 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 MEOX1P50221 254 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 STAT5BP51692 787 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 RRADP55042 308 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 SNAPC2Q13487 334 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 UBE3CQ15386 1083 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 MPEG1Q2M385 716 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 SLC35G1Q2M3R5 365 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 ARL13BQ3SXY8 428 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 FLYWCH1Q4VC44 716 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 C3orf38Q5JPI3 329 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 PALM2Q8IXS6 379 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 PQLC1Q8N2U9 271 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 MSL3Q8N5Y2 521 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 FBXO18Q8NFZ0 1043 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 BRIX1Q8TDN6 353 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 MSLNLQ96KJ4 702 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 MRGPRX1Q96LB2 322 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 CDC5LQ99459 802 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 COLEC11Q9BWP8 271 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 KATNBL1Q9H079 304 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 SACM1LQ9NTJ5 587 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 GJB4Q9NTQ9 266 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 COL20A1Q9P218 1284 aa3.52□□□□□ -1.85
HPS3-203ENST00000460822 SAE1Q9UBE0 346 aaPredicted RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 AFF4Q9UHB7 1163 aaKnown RBP3.52□□□□□ -1.85
HPS3-203ENST00000460822 TSC22D4Q9Y3Q8 395 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms