RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 DNAJC19Q96DA6 116 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 CPB2Q96IY4 423 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 B3GALT6Q96L58 329 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 ZFP42Q96MM3 310 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 PDZD7Q9H5P4 517 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 AVENQ9NQS1 362 aaPredicted RBP14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 USP18Q9UMW8 372 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 PCDHA7Q9UN72 937 aa14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-206ENST00000460767 NPHP3-ACAD11A0A0J9YXS1 232 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 FAM237AA0A1B0GTK4 181 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 DCDC2BA2VCK2 349 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 SFI1A8K8P3 1242 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 FOXD2O60548 495 aaPredicted RBP14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 PRKCBP05771 671 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 MYBP10242 640 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 MAPTP10636 758 aaKnown RBP14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 ADCY1Q08828 1119 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 DMP1Q13316 513 aaPredicted RBP14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 ZRSR1Q15695 479 aaKnown RBP14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 MAPK6Q16659 721 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 PPM1LQ5SGD2 360 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 CNNM4Q6P4Q7 775 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 SLC27A1Q6PCB7 646 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 ZNF852Q6ZMS4 543 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 TPRG1Q6ZUI0 275 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 GPBP1Q86WP2 473 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 CELF5Q8N6W0 485 aaKnown RBP14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 CHAMP1Q96JM3 812 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 IFT74Q96LB3 600 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 CLSTN3Q9BQT9 956 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 STRA6Q9BX79 667 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 CHRDQ9H2X0 955 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 ST6GALNAC4Q9H4F1 302 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 KBTBD4Q9NVX7 518 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 CFAP45Q9UL16 551 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 WDR87Q6ZQQ6 2873 aa14.95□□□□□ -0.02
SCAMP4-206ENST00000460767 TRIP11Q15643 1979 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 VWA8A3KMH1 1905 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 PPP1R37O75864 691 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 RPL17P18621 184 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 SCP2P22307 547 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 HSP90AA2PQ14568 343 aaPredicted RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 PPP2R5DQ14738 602 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 RESP18Q5W5W9 173 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 EEF1DP3Q658K8 133 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 CCDC73Q6ZRK6 1079 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 GLYCTKQ8IVS8 523 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 DEPTORQ8TB45 409 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 ITFG1Q8TB96 612 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 LNX1Q8TBB1 728 aaPredicted RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 LEO1Q8WVC0 666 aaPredicted RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 DDX1Q92499 740 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 ACO2Q99798 780 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 TTPALQ9BTX7 342 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 NXF3Q9H4D5 531 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 GDE1Q9NZC3 331 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 CCDC39Q9UFE4 941 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 KCNG1Q9UIX4 513 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 TNFSF13BQ9Y275 285 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 USP20Q9Y2K6 914 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 HES2Q9Y543 173 aa14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 MAP1BP46821 2468 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-206ENST00000460767 MYMKA6NI61 221 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 RETP07949 1114 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 NTHL1P78549 312 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 RAD51AP2Q09MP3 1159 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 ELAVL2Q12926 359 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 MTAPQ13126 283 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 PRPF4BQ13523 1007 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 RAB33AQ14088 237 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 PSMD5Q16401 504 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 PPM1JQ5JR12 505 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 RRAGBQ5VZM2 374 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 PRSS55Q6UWB4 352 aaPredicted RBP14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 CDR2LQ86X02 465 aaPredicted RBP14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 KXD1Q9BQD3 176 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 TRPV5Q9NQA5 729 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 KMT5AQ9NQR1 393 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 RAB23Q9ULC3 237 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 HPSEQ9Y251 543 aa14.93□□□□□ -0.02
SCAMP4-206ENST00000460767 K7ERI5 159 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 MAN2B1O00754 1011 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 N4BP3O15049 544 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 SLC16A4O15374 487 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 TADA2AO75478 443 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 PIGRP01833 764 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 CD72P21854 359 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 TXLNAP40222 546 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 TUSC3Q13454 348 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 NAB2Q15742 525 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 FOXD4L6Q3SYB3 417 aaPredicted RBP14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 PABPC1LQ4VXU2 614 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 TSSK4Q6SA08 328 aa14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 FOXD4L3Q6VB84 417 aaPredicted RBP14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 ST13P5Q8NFI4 369 aaPredicted RBP14.92□□□□□ -0.02
SCAMP4-206ENST00000460767 DDX12PQ92771 950 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms